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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Keywords HAS EXACT PHRASE "OXIDOREDUCTASE/PROTEIN BINDING"

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This query matches 11 Structures.

Refinements

Structure Determination Methodology

experimental (11)

Scientific Name of Source Organism

	Arabidopsis thaliana (3)
	Homo sapiens (3)
	Streptomyces sp. Acta 2897 (2)
	Synechococcus elongatus PCC 7942 = FACHB-805 (2)
	Escherichia coli K-12 (1)
	Lama glama (1)

Taxonomy

	Eukaryota (7)
	Bacteria (5)

Experimental Method

X-RAY DIFFRACTION (11)

Polymer Entity Type

Protein (11)

Refinement Resolution (Å)

	2.0 - 2.5 (4)
	2.5 - 3.0 (5)
	3.0 - 3.5 (2)

Release Date

	2005 - 2009 (1)
	2010 - 2014 (10)

Enzyme Classification Name

	Oxidoreductases (11)
	Transferases (1)

Symmetry Type

	Asymmetric (8)
	Cyclic (3)
	Dihedral (2)

SCOP Classification

	All alpha proteins (3)
	Artifacts (4)
	All beta proteins (1)
	Alpha and beta proteins (a/b) (1)

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1 to 11 of 11 Structures

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2F5Z \| pdb_00002f5z	Download File View File

Crystal Structure of Human Dihydrolipoamide Dehydrogenase (E3) Complexed to the E3-Binding Domain of Human E3-Binding Protein

Brautigam, C.A., Chuang, J.L., Wynn, R.M., Tomchick, D.R., Machius, M., Chuang, D.T.

(2006) Structure 14: 611-621

Released	2006-01-17
Method	X-RAY DIFFRACTION 2.18 Å
Organisms	Homo sapiens
Macromolecule	Dihydrolipoyl dehydrogenase (protein) Pyruvate dehydrogenase protein X component (protein)
Unique Ligands	FAD, SO4

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3B1J \| pdb_00003b1j	Download File View File

Crystal structure of Glyceraldehyde-3-Phosphate Dehydrogenase complexed with CP12 in the presence of copper from Synechococcus elongatus

Matsumura, H., Kai, A., Inoue, T.

(2011) Structure 19: 1846-1854

Released	2012-01-11
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Synechococcus elongatus PCC 7942 = FACHB-805
Macromolecule	CP12 (protein) Glyceraldehyde 3-phosphate dehydrogenase (NADP+) (protein)
Unique Ligands	CU, NAD

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3B1K \| pdb_00003b1k	Download File View File

Crystal structure of Glyceraldehyde-3-Phosphate Dehydrogenase complexed with CP12 in the absence of copper from Synechococcus elongatus

Matsumura, H., Kai, A., Inoue, T.

(2011) Structure 19: 1846-1854

Released	2012-01-11
Method	X-RAY DIFFRACTION 3.302 Å
Organisms	Synechococcus elongatus PCC 7942 = FACHB-805
Macromolecule	CP12 (protein) Glyceraldehyde 3-phosphate dehydrogenase (NADP+) (protein)
Unique Ligands	NAD

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3QV1 \| pdb_00003qv1	Download File View File

Crystal structure of the binary complex of photosyntetic A4 glyceraldehyde 3-phosphate dehydrogenase (GAPDH) with cp12-2, both from Arabidopsis thaliana.

Thumiger, A., Fermani, S., Falini, G., Marri, L., Sparla, F., Trost, P.

(2012) J Biological Chem 287: 21372-21383

Released	2012-02-29
Method	X-RAY DIFFRACTION 2 Å
Organisms	Arabidopsis thaliana
Macromolecule	CP12 protein (protein) Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (protein)
Unique Ligands	EDO, NAD, PEG, SO4

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3RNM \| pdb_00003rnm	Download File View File

The crystal structure of the subunit binding of human dihydrolipoamide transacylase (E2b) bound to human dihydrolipoamide dehydrogenase (E3)

Brautigam, C.A., Wynn, R.M., Chuang, J.C., Young, B.B., Chuang, D.T.

(2011) J Biological Chem 286: 23476-23488

Released	2011-05-04
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Dihydrolipoyl dehydrogenase, mitochondrial (protein) Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial (protein)
Unique Ligands	BME, FAD, NHE

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3RVD \| pdb_00003rvd	Download File View File

Crystal structure of the binary complex, obtained by soaking, of photosyntetic a4 glyceraldehyde 3-phosphate dehydrogenase (gapdh) with cp12-2, both from arabidopsis thaliana.

Fermani, S., Thumiger, A., Falini, G., Marri, L., Sparla, F., Trost, P.

(2012) J Biological Chem 287: 21372-21383

Released	2012-04-25
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Arabidopsis thaliana
Macromolecule	Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (protein) Photosyntetic glyceraldehyde-3-phosphate dehydrogenase (a4 isoform) (protein)
Unique Ligands	NAD, SO4

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4FHB \| pdb_00004fhb	Download File View File

Enhancing DHFR catalysis by binding of an allosteric regulator nanobody (Nb179)

Oyen, D.

(2013) Biochim Biophys Acta 1834: 2147-2157

Released	2013-04-24
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Escherichia coli K-12 Lama glama
Macromolecule	Dihydrofolate reductase (protein) Nb179 (protein)
Unique Ligands	FOL, NAP

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4FWF \| pdb_00004fwf	Download File View File

Complex structure of LSD2/AOF1/KDM1b with H3K4 mimic

Zhang, Q., Chen, Z.

(2013) Cell Res 23: 225-241

Released	2013-01-16
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens
Macromolecule	Histone H3.1 (protein) Lysine-specific histone demethylase 1B (protein)
Unique Ligands	FAD, ZN

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4N7R \| pdb_00004n7r	Download File View File

Crystal structure of Arabidopsis glutamyl-tRNA reductase in complex with its binding protein

Zhao, A., Fang, Y., Lin, Y., Gong, W., Liu, L.

(2014) Proc Natl Acad Sci U S A 111: 6630-6635

Released	2014-05-14
Method	X-RAY DIFFRACTION 2.802 Å
Organisms	Arabidopsis thaliana
Macromolecule	Genomic DNA, chromosome 3, P1 clone: MXL8 (protein) Glutamyl-tRNA reductase 1, chloroplastic (protein)

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4PWV \| pdb_00004pwv	Download File View File

Structure of P450sky (CYP163B3), a cytochrome P450 from skyllamycin biosynthesis in complex with a peptidyl carrier protein domain

Haslinger, K., Cryle, M.J.

(2014) Angew Chem Int Ed Engl 53: 8518-8522

Released	2014-07-23
Method	X-RAY DIFFRACTION 3 Å
Organisms	Streptomyces sp. Acta 2897
Macromolecule	P450 monooxygenase (protein) Peptide synthetase (protein)
Unique Ligands	HEM, KH4

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4PXH \| pdb_00004pxh	Download File View File

Structure of P450sky (CYP163B3), a cytochrome P450 from skyllamycin biosynthesis in complex with a peptidyl carrier protein domain

Haslinger, K., Cryle, M.J.

(2014) Angew Chem Int Ed Engl 53: 8518-8522

Released	2014-07-23
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Streptomyces sp. Acta 2897
Macromolecule	P450 monooxygenase (protein) Peptide synthetase (protein)
Unique Ligands	HEM, KH4

1 to 11 of 11 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

2F5Z | pdb_00002f5z

Crystal Structure of Human Dihydrolipoamide Dehydrogenase (E3) Complexed to the E3-Binding Domain of Human E3-Binding Protein

3B1J | pdb_00003b1j

Crystal structure of Glyceraldehyde-3-Phosphate Dehydrogenase complexed with CP12 in the presence of copper from Synechococcus elongatus

3B1K | pdb_00003b1k

Crystal structure of Glyceraldehyde-3-Phosphate Dehydrogenase complexed with CP12 in the absence of copper from Synechococcus elongatus

3QV1 | pdb_00003qv1

Crystal structure of the binary complex of photosyntetic A4 glyceraldehyde 3-phosphate dehydrogenase (GAPDH) with cp12-2, both from Arabidopsis thaliana.

3RNM | pdb_00003rnm

The crystal structure of the subunit binding of human dihydrolipoamide transacylase (E2b) bound to human dihydrolipoamide dehydrogenase (E3)

3RVD | pdb_00003rvd

Crystal structure of the binary complex, obtained by soaking, of photosyntetic a4 glyceraldehyde 3-phosphate dehydrogenase (gapdh) with cp12-2, both from arabidopsis thaliana.

4FHB | pdb_00004fhb

Enhancing DHFR catalysis by binding of an allosteric regulator nanobody (Nb179)

4FWF | pdb_00004fwf

Complex structure of LSD2/AOF1/KDM1b with H3K4 mimic

4N7R | pdb_00004n7r

Crystal structure of Arabidopsis glutamyl-tRNA reductase in complex with its binding protein

4PWV | pdb_00004pwv

Structure of P450sky (CYP163B3), a cytochrome P450 from skyllamycin biosynthesis in complex with a peptidyl carrier protein domain

4PXH | pdb_00004pxh

Structure of P450sky (CYP163B3), a cytochrome P450 from skyllamycin biosynthesis in complex with a peptidyl carrier protein domain

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2F5Z | pdb_00002f5z

3B1J | pdb_00003b1j

3B1K | pdb_00003b1k

3QV1 | pdb_00003qv1

3RNM | pdb_00003rnm

3RVD | pdb_00003rvd

4FHB | pdb_00004fhb

4FWF | pdb_00004fwf

4N7R | pdb_00004n7r

4PWV | pdb_00004pwv

4PXH | pdb_00004pxh