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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Keywords HAS EXACT PHRASE "PROTEIN TRANSPORT/SIGNALING PROTEIN"

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This query matches 9 Structures.

Refinements

Structure Determination Methodology

experimental (9)

Scientific Name of Source Organism

	Homo sapiens (4)
	Bos taurus (3)
	Mus musculus (3)
	Saccharomyces cerevisiae (2)
	Drosophila melanogaster (1)
	Influenza A virus (A/Puerto Rico/8/1934(H1N1)) (1)

Taxonomy

	Eukaryota (9)
	Eukaryota (eukaryotes) (1)
	Riboviria (1)

Experimental Method

X-RAY DIFFRACTION (9)

Polymer Entity Type

Protein (9)

Refinement Resolution (Å)

	1.5 - 2.0 (2)
	2.0 - 2.5 (2)
	2.5 - 3.0 (3)
	3.0 - 3.5 (2)

Release Date

	2000 - 2004 (2)
	2005 - 2009 (5)
	2010 - 2014 (1)
	2015 - 2019 (1)

Enzyme Classification Name

Hydrolases (1)

Membrane Protein Annotation

OPM (1)

Symmetry Type

	Asymmetric (8)
	Cyclic (3)
	Octahedral (1)

SCOP Classification

	Alpha and beta proteins (a+b) (5)
	All alpha proteins (4)
	All beta proteins (4)
	Alpha and beta proteins (a/b) (1)
	Small proteins (1)
	Artifacts (1)

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1 to 9 of 9 Structures

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1M2O \| pdb_00001m2o	Download File View File

Crystal Structure of the Sec23-Sar1 complex

Bi, X., Corpina, R.A., Goldberg, J.

(2002) Nature 419: 271-277

Released	2002-09-20
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	GTP-binding protein SAR1 (protein) protein transport protein SEC23 (protein)
Unique Ligands	GNP, MG, ZN

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1OM9 \| pdb_00001om9	Download File View File

Structure of the GGA1-appendage in complex with the p56 binding peptide

Collins, B.M., Praefcke, G.J.K., Robinson, M.S., Owen, D.J.

(2003) Nat Struct Biol 10: 607-613

Released	2003-07-29
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	15-mer peptide fragment of p56 (protein) ADP-ribosylation factor binding protein GGA1 (protein)

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1WR6 \| pdb_00001wr6	Download File View File

Crystal structure of GGA3 GAT domain in complex with ubiquitin

Kawasaki, M., Shiba, T., Shiba, Y., Yamaguchi, Y., Matsugaki, N., Igarashi, N., Suzuki, M., Kato, R., Kato, K., Nakayama, K., Wakatsuki, S.

(2005) Genes Cells 10: 639-654

Released	2005-06-28
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Bos taurus Homo sapiens
Macromolecule	ADP-ribosylation factor binding protein GGA3 (protein) ubiquitin (protein)

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1WRD \| pdb_00001wrd	Download File View File

Crystal structure of Tom1 GAT domain in complex with ubiquitin

Akutsu, M., Kawasaki, M., Katoh, Y., Shiba, T., Yamaguchi, Y., Kato, R., Kato, K., Nakayama, K., Wakatsuki, S.

(2005) FEBS Lett 579: 5385-5391

Released	2005-10-11
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Bos taurus Homo sapiens
Macromolecule	Target of Myb protein 1 (protein) Ubiquitin (protein)

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2DX5 \| pdb_00002dx5	Download File View File

The complex structure between the mouse EAP45-GLUE domain and ubiquitin

Hirano, S., Suzuki, N., Slagsvold, T., Kawasaki, M., Trambaiolo, D., Kato, R., Stenmark, H., Wakatsuki, S.

(2006) Nat Struct Mol Biol 13: 1031-1032

Released	2006-10-10
Method	X-RAY DIFFRACTION 3.35 Å
Organisms	Bos taurus Mus musculus
Macromolecule	Ubiquitin (protein) Vacuolar protein sorting protein 36 (protein)

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2FNJ \| pdb_00002fnj	Download File View File

Crystal structure of a B30.2/SPRY domain-containing protein GUSTAVUS in complex with Elongin B and Elongin C

Woo, J.S., Oh, B.H.

(2006) EMBO J 25: 1353-1363

Released	2006-03-21
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Drosophila melanogaster Mus musculus
Macromolecule	CG2944-PF, isoform F (protein) Transcription elongation factor B polypeptide 1 (protein) Transcription elongation factor B polypeptide 2 (protein)

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2GED \| pdb_00002ged	Download File View File

Signal Recognition Particle Receptor Beta-Subunit in nucleotide-free dimerized form

Schmidt, D., Schwartz, T.U.

(2006) Proc Natl Acad Sci U S A 103: 6823-6828

Released	2006-04-18
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Signal recognition particle receptor beta subunit (protein)
Unique Ligands	SO4

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4TKN \| pdb_00004tkn	Download File View File

Structure of the SNX17 FERM domain bound to the second NPxF motif of KRIT1

Stiegler, A.L., Zhang, R., Liu, W., Boggon, T.J.

(2014) J Biological Chem 289: 25362-25373

Released	2014-07-30
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	Krev interaction trapped protein 1 (protein) Sorting nexin-17 (protein)

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4ZDU \| pdb_00004zdu	Download File View File

Crystal structure of importin-alpha bound to a non-classical nuclear localization signal of the influenza A virus nucleoprotein

Nakada, R., Hirano, H., Matsuura, Y.

(2015) Sci Rep 5: 15055-15055

Released	2015-10-21
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Influenza A virus (A/Puerto Rico/8/1934(H1N1)) Mus musculus
Macromolecule	Importin subunit alpha-1 (protein) Peptide from Nucleoprotein (protein)

1 to 9 of 9 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1M2O | pdb_00001m2o

Crystal Structure of the Sec23-Sar1 complex

1OM9 | pdb_00001om9

Structure of the GGA1-appendage in complex with the p56 binding peptide

1WR6 | pdb_00001wr6

Crystal structure of GGA3 GAT domain in complex with ubiquitin

1WRD | pdb_00001wrd

Crystal structure of Tom1 GAT domain in complex with ubiquitin

2DX5 | pdb_00002dx5

The complex structure between the mouse EAP45-GLUE domain and ubiquitin

2FNJ | pdb_00002fnj

Crystal structure of a B30.2/SPRY domain-containing protein GUSTAVUS in complex with Elongin B and Elongin C

2GED | pdb_00002ged

Signal Recognition Particle Receptor Beta-Subunit in nucleotide-free dimerized form

4TKN | pdb_00004tkn

Structure of the SNX17 FERM domain bound to the second NPxF motif of KRIT1

4ZDU | pdb_00004zdu

Crystal structure of importin-alpha bound to a non-classical nuclear localization signal of the influenza A virus nucleoprotein

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1M2O | pdb_00001m2o

1OM9 | pdb_00001om9

1WR6 | pdb_00001wr6

1WRD | pdb_00001wrd

2DX5 | pdb_00002dx5

2FNJ | pdb_00002fnj

2GED | pdb_00002ged

4TKN | pdb_00004tkn

4ZDU | pdb_00004zdu