4Q7D
Wild type Fc (wtFc)
- PDB DOI: https://doi.org/10.2210/pdb4Q7D/pdb
- Classification: IMMUNE SYSTEM
- Organism(s): Homo sapiens
- Expression System: Homo sapiens
- Mutation(s): No 
- Deposited: 2014-04-24 Released: 2014-07-23 
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.35 Å
- R-Value Free: 0.264 
- R-Value Work: 0.211 
wwPDB Validation   3D Report Full Report
This is version 2.2 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Ig gamma-1 chain C region | 221 | Homo sapiens | Mutation(s): 0  Gene Names: IGHG1 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P01857 (Homo sapiens) Explore P01857  Go to UniProtKB:  P01857 | |||||
PHAROS:  P01857 GTEx:  ENSG00000211896  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P01857 | ||||
Sequence AnnotationsExpand | |||||
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Oligosaccharides
Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | 2D Diagram | Glycosylation | 3D Interactions |
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | C, D | 8 | N-Glycosylation | ||
Glycosylation Resources | |||||
GlyTouCan:  G80858MF GlyCosmos:  G80858MF GlyGen:  G80858MF |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.35 Å
- R-Value Free: 0.264 
- R-Value Work: 0.211 
- Space Group: P 21 21 21
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 49.52 | α = 90 |
b = 79.48 | β = 90 |
c = 137.94 | γ = 90 |
Software Name | Purpose |
---|---|
Blu-Ice | data collection |
PHASER | phasing |
PHENIX | refinement |
MOSFLM | data reduction |
SCALA | data scaling |
Entry History 
Deposition Data
- Released Date: 2014-07-23  Deposition Author(s): Ahmed, A.A., Giddens, J., Pincetic, A., Lomino, J.V., Ravetch, J.V., Wang, L.X., Bjorkman, P.J.
Revision History (Full details and data files)
- Version 1.0: 2014-07-23
Type: Initial release - Version 1.1: 2014-07-30
Changes: Database references - Version 1.2: 2014-09-03
Changes: Database references - Version 2.0: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Advisory, Atomic model, Data collection, Derived calculations, Structure summary - Version 2.1: 2023-09-20
Changes: Advisory, Data collection, Database references, Refinement description, Structure summary - Version 2.2: 2024-01-10
Changes: Advisory, Derived calculations