RCSB PDB - 5QR4: PanDDA analysis group deposition -- Crystal Structure of human ALAS2A in complex with Z2856434826

 5QR4

PanDDA analysis group deposition -- Crystal Structure of human ALAS2A in complex with Z2856434826


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.57 Å
  • R-Value Free: 0.238 
  • R-Value Work: 0.214 
  • R-Value Observed: 0.215 

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 

Created with Raphaël 2.3.0Worse 01 BetterLigand structure goodness of fit to experimental dataBest fitted NUYClick on this verticalbar to view details

This is version 1.1 of the entry. See complete history



Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
5-aminolevulinate synthase, erythroid-specific, mitochondrialA [auth B],
B [auth A]
469Homo sapiensMutation(s): 0 
Gene Names: ALAS2ALASEASB
EC: 2.3.1.37
UniProt & NIH Common Fund Data Resources
Find proteins for P22557 (Homo sapiens)
Explore P22557 
Go to UniProtKB:  P22557
PHAROS:  P22557
GTEx:  ENSG00000158578 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP22557
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.57 Å
  • R-Value Free: 0.238 
  • R-Value Work: 0.214 
  • R-Value Observed: 0.215 
  • Space Group: C 1 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 127.359α = 90
b = 108.967β = 109.32
c = 76.099γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
Aimlessdata scaling
PDB_EXTRACTdata extraction
XDSdata reduction
REFMACphasing

Structure Validation

View Full Validation Report



Ligand Structure Quality Assessment 

Created with Raphaël 2.3.0Worse 01 BetterLigand structure goodness of fit to experimental dataBest fitted NUYClick on this verticalbar to view details

Entry History 

Revision History  (Full details and data files)

  • Version 1.0: 2019-08-07
    Type: Initial release
  • Version 1.1: 2024-03-06
    Changes: Data collection, Database references