Download MendeleyMarine bacterial GH16 hydrolase
Yang, J.To be published.
7FGZ
Marine bacterial GH16 hydrolase
- PDB DOI: https://doi.org/10.2210/pdb7FGZ/pdb
- Classification: HYDROLASE
- Organism(s): Aquimarina sp.
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2021-07-28 Released: 2022-08-03
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.20 Å
- R-Value Free: 0.209
- R-Value Work: 0.162
- R-Value Observed: 0.164
Starting Model: experimental
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This is version 1.1 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| GH16 hydrolase | 269 | Aquimarina sp. | Mutation(s): 0 |  | |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| EPE (Subject of Investigation/LOI) Query on EPE | C [auth A], D [auth A] | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID C8 H18 N2 O4 S JKMHFZQWWAIEOD-UHFFFAOYSA-N |  | ||
| CA (Subject of Investigation/LOI) Query on CA | B [auth A] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.20 Å
- R-Value Free: 0.209
- R-Value Work: 0.162
- R-Value Observed: 0.164
- Space Group: P 2 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 40.449 | α = 90 |
| b = 77.293 | β = 90 |
| c = 82.366 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| Aimless | data scaling |
| PDB_EXTRACT | data extraction |
| CrysalisPro | data reduction |
| MOLREP | phasing |
Entry History
Deposition Data
- Released Date: 2022-08-03 Deposition Author(s): Yang, J.
Revision History (Full details and data files)
- Version 1.0: 2022-08-03
Type: Initial release - Version 1.1: 2023-11-29
Changes: Data collection, Refinement description
