9LI5 | pdb_00009li5

Structure of the wild-type ABCC2 in Arabidopsis thaliana in the apo state

PDB DOI: https://doi.org/10.2210/pdb9LI5/pdb
EM Map EMD-63111: EMDB EMDataResource

Classification: TRANSPORT PROTEIN
Organism(s): Arabidopsis thaliana
Expression System: Homo sapiens
Mutation(s): No

Deposited: 2025-01-13 Released: 2025-12-24
Deposition Author(s): Sun, L., Liu, X., Yang, Z., Gao, Y., Qiu, X.
Funding Organization(s): National Science Foundation (NSF, China)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.90 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Structure of the wild-type ABCC2 in Arabidopsis thaliana in the apo state

Sun, L., Liu, X., Yang, Z., Gao, Y., Qiu, X.

To be published.

Macromolecule Content

Total Structure Weight: 182.31 kDa
Atom Count: 11,237
Modeled Residue Count: 1,422
Deposited Residue Count: 1,623
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
ABC transporter C family member 2	A	1,623	Arabidopsis thaliana	Mutation(s): 0 Gene Names: ABCC2, EST4, MRP2, At2g34660, T29F13.13 EC: 7.6.2.2
UniProt
Find proteins for Q42093 (Arabidopsis thaliana) Explore Q42093 Go to UniProtKB: Q42093
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q42093
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.90 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

EM Software:

Task	Software Package	Version
MODEL REFINEMENT	PHENIX	1.20.1_4487:

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2025-12-24

Deposition Author(s):

Funding Organization	Location	Grant Number
National Science Foundation (NSF, China)	China	32322041, 32321001, 31900885

Revision History (Full details and data files)

Version 1.0: 2025-12-24
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.