1DEW
CRYSTAL STRUCTURE OF HUMAN APE1 BOUND TO ABASIC DNA
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
E [auth A] | d1dewa_ | Alpha and beta proteins (a+b) | DNase I-like | DNase I-like | DNase I-like | DNA repair endonuclease Hap1 | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
F [auth B] | d1dewb_ | Alpha and beta proteins (a+b) | DNase I-like | DNase I-like | DNase I-like | DNA repair endonuclease Hap1 | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
E [auth A] | SCOP2B Superfamily | DNase I-like | 8036725 | 3000957 | SCOP2B (2022-06-29) |
F [auth B] | SCOP2B Superfamily | DNase I-like | 8036725 | 3000957 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
E [auth A] | Exo_endo_phos | e1dewA1 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: DNase I-like (From Topology) | T: DNase I-like | F: Exo_endo_phos | ECOD (1.6) |
F [auth B] | Exo_endo_phos | e1dewB1 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: DNase I-like (From Topology) | T: DNase I-like | F: Exo_endo_phos | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
E [auth A] | 3.60.10.10 | Alpha Beta | 4-Layer Sandwich | Deoxyribonuclease I | Chain A | CATH (4.3.0) |
F [auth B] | 3.60.10.10 | Alpha Beta | 4-Layer Sandwich | Deoxyribonuclease I | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
E [auth A], F [auth B] | PF03372 | Endonuclease/Exonuclease/phosphatase family (Exo_endo_phos) | Endonuclease/Exonuclease/phosphatase family | This large family of proteins includes magnesium dependent endonucleases and a large number of phosphatases involved in intracellular signalling [1]. This family includes: AP endonuclease proteins EC:4.2.99.18 e.g Swiss:P27695, DNase I proteins EC:3. ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
E [auth A], F [auth B] | IPR036691 | Endonuclease/exonuclease/phosphatase superfamily | Homologous Superfamily |
E [auth A], F [auth B] | IPR005135 | Endonuclease/exonuclease/phosphatase | Domain |
E [auth A], F [auth B] | IPR020847 | AP endonuclease 1, binding site | Binding Site |
E [auth A], F [auth B] | IPR020848 | AP endonuclease 1, conserved site | Conserved Site |
E [auth A], F [auth B] | IPR004808 | AP endonuclease 1 | Family |