1P5D
Enzyme-ligand complex of P. aeruginosa PMM/PGM
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Protein Modification Annotation
- Structure Motif: Primary M-CSA Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth X] | d1p5dx2 | Alpha and beta proteins (a/b) | Phosphoglucomutase, first 3 domains | Phosphoglucomutase, first 3 domains | Phosphoglucomutase, first 3 domains | Phosphomannomutase/phosphoglucomutase, middle and C-terminal domain | (Pseudomonas aeruginosa ) [TaxId: 287 ], | SCOPe (2.08) |
A [auth X] | d1p5dx1 | Alpha and beta proteins (a/b) | Phosphoglucomutase, first 3 domains | Phosphoglucomutase, first 3 domains | Phosphoglucomutase, first 3 domains | Phosphomannomutase/phosphoglucomutase, N-terminal domain | (Pseudomonas aeruginosa ) [TaxId: 287 ], | SCOPe (2.08) |
A [auth X] | d1p5dx4 | Alpha and beta proteins (a+b) | TBP-like | Phosphoglucomutase, C-terminal domain | Phosphoglucomutase, C-terminal domain | Phosphomannomutase/phosphoglucomutase | (Pseudomonas aeruginosa ) [TaxId: 287 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth X] | SCOP2 Family | Phosphoglucomutase, first 3 domains | 8025860 | 4000812 | SCOP2 (2022-06-29) |
A [auth X] | SCOP2 Family | Phosphoglucomutase, first 3 domains | 8025861 | 4000812 | SCOP2 (2022-06-29) |
A [auth X] | SCOP2 Family | Phosphoglucomutase, first 3 domains | 8025862 | 4000812 | SCOP2 (2022-06-29) |
A [auth X] | SCOP2 Family | Phosphoglucomutase C-terminal domain-like | 8025863 | 4002037 | SCOP2 (2022-06-29) |
A [auth X] | SCOP2 Superfamily | Phosphoglucomutase, first 3 domains | 8038239 | 3001532 | SCOP2 (2022-06-29) |
A [auth X] | SCOP2 Superfamily | Phosphoglucomutase, first 3 domains | 8038240 | 3001532 | SCOP2 (2022-06-29) |
A [auth X] | SCOP2 Superfamily | Phosphoglucomutase, first 3 domains | 8038241 | 3001532 | SCOP2 (2022-06-29) |
A [auth X] | SCOP2 Superfamily | Phosphoglucomutase C-terminal domain-like | 8038242 | 3000732 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth X] | PGM_PMM_IV | e1p5dX1 | A: a+b two layers | X: TBP-like | H: Phosphoglucomutase, C-terminal domain (From Topology) | T: Phosphoglucomutase, C-terminal domain | F: PGM_PMM_IV | ECOD (1.6) |
A [auth X] | PGM_PMM_I | e1p5dX2 | A: a/b three-layered sandwiches | X: Phosphoglucomutase, first 3 domains (From Topology) | H: Phosphoglucomutase, first 3 domains (From Topology) | T: Phosphoglucomutase, first 3 domains | F: PGM_PMM_I | ECOD (1.6) |
A [auth X] | PGM_PMM_II | e1p5dX3 | A: a/b three-layered sandwiches | X: Phosphoglucomutase, first 3 domains (From Topology) | H: Phosphoglucomutase, first 3 domains (From Topology) | T: Phosphoglucomutase, first 3 domains | F: PGM_PMM_II | ECOD (1.6) |
A [auth X] | PGM_PMM_III | e1p5dX4 | A: a/b three-layered sandwiches | X: Phosphoglucomutase, first 3 domains (From Topology) | H: Phosphoglucomutase, first 3 domains (From Topology) | T: Phosphoglucomutase, first 3 domains | F: PGM_PMM_III | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth X] | 3.40.120.10 | Alpha Beta | 3-Layer(aba) Sandwich | Alpha-D-Glucose-1,6-Bisphosphate | Chain A, domain 3 | CATH (4.3.0) |
A [auth X] | 3.30.310.50 | Alpha Beta | 2-Layer Sandwich | TATA-Binding Protein | Alpha-D-phosphohexomutase, C-terminal domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth X] | PF02878 | Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I (PGM_PMM_I) | Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I | - | Domain |
A [auth X] | PF02879 | Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II (PGM_PMM_II) | Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II | - | Domain |
A [auth X] | PF00408 | Phosphoglucomutase/phosphomannomutase, C-terminal domain (PGM_PMM_IV) | Phosphoglucomutase/phosphomannomutase, C-terminal domain | - | Repeat |
A [auth X] | PF02880 | Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III (PGM_PMM_III) | Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
A [auth X] | SEP | Parent Component: SER :  AA0037 :  O-phospho-L-serine MOD:00046 |
Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage
Chains | Enzyme Name | Description | Catalytic Residues |
---|---|---|---|
phosphomannomutase/ phosphoglucomutase M-CSA #194 | Phosphomannomutase or phosphoglucomutase (PMM/PGM) from Pseudomonas aeruginosa can catalyse the same reaction in two different substrates. It catalyses the transfer of a phosphoryl group from the 6 position to the 1 position in either mannose 6-P or glucose 6-P. PMM/PGM activity is required for the biosynthesis of lipopolysaccharides in Pseudomonas aeruginosa. | Defined by 9 residues: ARG:A-20 [auth X-20]SER:A-108 [auth X-108]HIS:A-109 [auth X-109]LYS:A-118 [auth X-118]ASP:A-242 [auth X-242]ASP:A-244 [auth X-244]ASP:A-246 [auth X-246]ARG:A-247 [auth X-247]HIS:A-329 [auth X-329] | EC: 5.4.2.8 (PDB Primary Data) EC: 5.4.2.2 (UniProt) |