1WMV | pdb_00001wmv

Solution structure of the second WW domain of WWOX

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1wmva1	All beta proteins	WW domain-like	WW domain	automated matches	automated matches	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
A	d1wmva2	Artifacts	Tags	Tags	Tags	N-terminal Tags	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	WW domain	8081424	4002695	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	WW domain	8081425	3001621	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	WW	e1wmvA1	A: beta meanders	X: WW domain-like	H: WW domain (From Topology)	T: WW domain	F: WW	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.20.70.10	Mainly Beta	Single Sheet	Ubiquitin Ligase Nedd4	Chain: W	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00397	WW domain (WW)	WW domain	The WW domain is a protein module with two highly conserved tryptophans that binds proline-rich peptide motifs in vitro.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	WW domain containing oxidoreductase	oxidoreductase activity catalytic activity transcription coactivator activity transcription regulator activity transcription coregulator activity protein-macromolecule adaptor activity molecular adaptor activity protein binding binding enzyme binding identical protein binding	developmental process multicellular organismal process cellular developmental process ossification cell differentiation cellular process osteoblast differentiation cellular response to stimulus regulation of cellular process response to stimulus negative regulation of signaling signaling negative regulation of biological process regulation of signal transduction developmental process multicellular organismal process cellular developmental process ossification cell differentiation cellular process osteoblast differentiation cellular response to stimulus regulation of cellular process response to stimulus negative regulation of signaling signaling negative regulation of biological process regulation of signal transduction negative regulation of cell communication cell communication negative regulation of Wnt signaling pathway negative regulation of cellular process signal transduction Wnt signaling pathway regulation of signaling regulation of biological process cell surface receptor signaling pathway regulation of Wnt signaling pathway negative regulation of response to stimulus biological regulation negative regulation of signal transduction regulation of response to stimulus regulation of cell communication cellular response to endogenous stimulus cellular response to growth factor stimulus response to transforming growth factor beta cellular response to transforming growth factor beta stimulus response to endogenous stimulus response to growth factor signal transduction by p53 class mediator cell death intracellular signal transduction apoptotic signaling pathway intrinsic apoptotic signaling pathway by p53 class mediator apoptotic process intrinsic apoptotic signaling pathway programmed cell death positive regulation of cell communication positive regulation of signal transduction signal transduction in absence of ligand positive regulation of biological process regulation of programmed cell death positive regulation of extrinsic apoptotic signaling pathway in absence of ligand extrinsic apoptotic signaling pathway positive regulation of apoptotic signaling pathway positive regulation of response to stimulus extrinsic apoptotic signaling pathway in absence of ligand positive regulation of cellular process positive regulation of programmed cell death regulation of apoptotic process positive regulation of extrinsic apoptotic signaling pathway positive regulation of apoptotic process regulation of extrinsic apoptotic signaling pathway regulation of extrinsic apoptotic signaling pathway in absence of ligand regulation of apoptotic signaling pathway positive regulation of signaling multicellular organism development anatomical structure morphogenesis skeletal system development anatomical structure development animal organ development skeletal system morphogenesis animal organ morphogenesis system development positive regulation of DNA-templated transcription RNA metabolic process positive regulation of macromolecule biosynthetic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process positive regulation of metabolic process DNA-templated transcription regulation of RNA metabolic process transcription by RNA polymerase II positive regulation of biosynthetic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of transcription by RNA polymerase II positive regulation of nucleobase-containing compound metabolic process primary metabolic process regulation of macromolecule metabolic process positive regulation of transcription by RNA polymerase II nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process positive regulation of RNA metabolic process regulation of gene expression biosynthetic process positive regulation of RNA biosynthetic process metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle RNA polymerase II transcription regulator complex protein-containing complex nucleus nuclear protein-containing complex transcription regulator complex cytosol membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle RNA polymerase II transcription regulator complex protein-containing complex nucleus nuclear protein-containing complex transcription regulator complex cytosol lytic vacuole vacuole lysosome Golgi apparatus endomembrane system

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR002347	Short-chain dehydrogenase/reductase SDR	Family
A	IPR036020	WW domain superfamily	Homologous Superfamily
A	IPR042732	WWOX, classical (c)-like SDR domain	Domain
A	IPR036291	NAD(P)-binding domain superfamily	Homologous Superfamily
A	IPR001202	WW domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: Q9NZC7	developmental and epileptic encephalopathy, 28 esophageal squamous cell carcinoma esophageal cancer squamous cell carcinoma autosomal recessive spinocerebellar ataxia 12 46,XY partial gonadal dysgenesis breast carcinoma juvenile idiopathic arthritis tuberculosis gastric neoplasm Juvenile arthritis malignant glioma benign neoplasm of esophagus neoplasm of esophagus ovarian cancer developmental and epileptic encephalopathy, 28 esophageal squamous cell carcinoma esophageal cancer squamous cell carcinoma autosomal recessive spinocerebellar ataxia 12 46,XY partial gonadal dysgenesis breast carcinoma juvenile idiopathic arthritis tuberculosis gastric neoplasm Juvenile arthritis malignant glioma benign neoplasm of esophagus neoplasm of esophagus ovarian cancer carcinoma of esophagus psoriasis developmental and epileptic encephalopathy, 1 spinocerebellar ataxia type 4 spinocerebellar ataxia type 7 esophagus carcinoma in situ hereditary diffuse gastric adenocarcinoma large cell medulloblastoma Alzheimer disease autosomal dominant cerebellar ataxia benign urinary system neoplasm neurodegenerative disease cancer pancreatic intraductal papillary-mucinous carcinoma cerebellar ataxia spinocerebellar ataxia type 1 spinocerebellar ataxia type 5 gastric cancer intellectual disability malignant ependymoma astrocytic tumor medulloblastoma breast cancer osteosarcoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia developmental and epileptic encephalopathy spinocerebellar ataxia type 2 epilepsy spinocerebellar ataxia type 6

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.