2OBE
Crystal Structure of Chimpanzee Adenovirus (Type 68/Simian 25) Major Coat Protein Hexon
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2obea1 | All beta proteins | Nucleoplasmin-like/VP (viral coat and capsid proteins) | Group II dsDNA viruses VP | automated matches | automated matches | (Simian adenovirus 25 ) [TaxId: 175567 ], | SCOPe (2.08) |
B | d2obeb1 | All beta proteins | Nucleoplasmin-like/VP (viral coat and capsid proteins) | Group II dsDNA viruses VP | automated matches | automated matches | (Simian adenovirus 25 ) [TaxId: 175567 ], | SCOPe (2.08) |
C | d2obec1 | All beta proteins | Nucleoplasmin-like/VP (viral coat and capsid proteins) | Group II dsDNA viruses VP | automated matches | automated matches | (Simian adenovirus 25 ) [TaxId: 175567 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Adeno_hexon | e2obeA1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Adeno_hexon | ECOD (1.6) |
A | Adeno_hexon_C | e2obeA2 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Adeno_hexon_C | ECOD (1.6) |
B | Adeno_hexon | e2obeB1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Adeno_hexon | ECOD (1.6) |
B | Adeno_hexon_C | e2obeB2 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Adeno_hexon_C | ECOD (1.6) |
C | Adeno_hexon | e2obeC1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Adeno_hexon | ECOD (1.6) |
C | Adeno_hexon_C | e2obeC2 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Adeno_hexon_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01065 | Hexon, adenovirus major coat protein, N-terminal domain (Adeno_hexon) | Hexon, adenovirus major coat protein, N-terminal domain | Hexon is the major coat protein from adenovirus type 2. Hexon forms a homo-trimer. The 240 copies of the hexon trimer are organised so that 12 lie on each of the 20 facets. The central 9 hexons in a facet are cemented together by 12 copies of polype ... | Domain | |
PF03678 | Hexon, adenovirus major coat protein, C-terminal domain (Adeno_hexon_C) | Hexon, adenovirus major coat protein, C-terminal domain | Hexon is the major coat protein from adenovirus type 2. Hexon forms a homo-trimer. The 240 copies of the hexon trimer are organised so that 12 lie on each of the 20 facets. The central 9 hexons in a facet are cemented together by 12 copies of polype ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR044942 | Adenovirus Pll, hexon, subdomain 2 | Homologous Superfamily | |
IPR016107 | Adenovirus Pll, hexon, N-terminal | Domain | |
IPR016108 | Adenovirus Pll, hexon, C-terminal | Domain | |
IPR016112 | Group II dsDNA virus coat/capsid protein | Homologous Superfamily | |
IPR037542 | Adenovirus hexon protein | Family |