Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad3cx5a1 Alpha and beta proteins (a+b) LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase MPP-like Cytochrome bc1 core subunit 1 (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Ld3cx5l1 Alpha and beta proteins (a+b) LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase MPP-like Cytochrome bc1 core subunit 1 (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Bd3cx5b1 Alpha and beta proteins (a+b) LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase MPP-like Cytochrome bc1 core subunit 2 (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Md3cx5m1 Alpha and beta proteins (a+b) LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase MPP-like Cytochrome bc1 core subunit 2 (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Dd3cx5d1 All alpha proteins Cytochrome c Cytochrome c Cytochrome bc1 domain Cytochrome bc1 domain (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Dd3cx5d2 Membrane and cell surface proteins and peptides Single transmembrane helix Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Od3cx5o1 All alpha proteins Cytochrome c Cytochrome c Cytochrome bc1 domain Cytochrome bc1 domain (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Od3cx5o2 Membrane and cell surface proteins and peptides Single transmembrane helix Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Ed3cx5e1 All beta proteins ISP domain ISP domain Rieske iron-sulfur protein (ISP) ISP subunit of the mitochondrial cytochrome bc1-complex, water-soluble domain (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Ed3cx5e2 Membrane and cell surface proteins and peptides Single transmembrane helix ISP transmembrane anchor ISP transmembrane anchor Iron-sulfur subunit (ISP) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane region (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Pd3cx5p1 All beta proteins ISP domain ISP domain Rieske iron-sulfur protein (ISP) ISP subunit of the mitochondrial cytochrome bc1-complex, water-soluble domain (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Pd3cx5p2 Membrane and cell surface proteins and peptides Single transmembrane helix ISP transmembrane anchor ISP transmembrane anchor Iron-sulfur subunit (ISP) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane region (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Gd3cx5g_ Membrane and cell surface proteins and peptides 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) automated matches (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Rd3cx5r_ Membrane and cell surface proteins and peptides 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) automated matches (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Hd3cx5h_ Membrane and cell surface proteins and peptides Single transmembrane helix Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Sd3cx5s_ Membrane and cell surface proteins and peptides Single transmembrane helix Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Id3cx5i_ Membrane and cell surface proteins and peptides Single transmembrane helix Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) automated matches (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Td3cx5t_ Membrane and cell surface proteins and peptides Single transmembrane helix Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) automated matches (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Jd3cx5j_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) Immunoglobulin heavy chain variable domain, VH house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ud3cx5u_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) Immunoglobulin heavy chain variable domain, VH house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Kd3cx5k_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) Immunoglobulin light chain kappa variable domain, VL-kappa house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Vd3cx5v_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) Immunoglobulin light chain kappa variable domain, VL-kappa house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Wd3cx5w_ All alpha proteins Cytochrome c Cytochrome c monodomain cytochrome c Mitochondrial cytochrome c (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Cd3cx5c2 Membrane and cell surface proteins and peptides Heme-binding four-helical bundle Transmembrane di-heme cytochromes Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) automated matches (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Cd3cx5c1 Membrane and cell surface proteins and peptides a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) automated matches automated matches (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Nd3cx5n2 Membrane and cell surface proteins and peptides Heme-binding four-helical bundle Transmembrane di-heme cytochromes Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) automated matches (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Nd3cx5n1 Membrane and cell surface proteins and peptides a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) automated matches automated matches (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Fd3cx5f_ Membrane and cell surface proteins and peptides Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) automated matches (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Qd3cx5q_ Membrane and cell surface proteins and peptides Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) automated matches (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyMPP-like 8027913 4002871 SCOP2 (2022-06-29)
ASCOP2 FamilyMPP-like 8027915 4002871 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyLuxS/MPP-like metallohydrolase 8040292 3001831 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyLuxS/MPP-like metallohydrolase 8040294 3001831 SCOP2 (2022-06-29)
LSCOP2B SuperfamilyLuxS/MPP-like metallohydrolase 8040292 3001831 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyLuxS/MPP-like metallohydrolase 8040294 3001831 SCOP2B (2022-06-29)
BSCOP2 FamilyMPP-like 8027918 4002871 SCOP2 (2022-06-29)
BSCOP2 FamilyMPP-like 8027921 4002871 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyLuxS/MPP-like metallohydrolase 8040297 3001831 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyLuxS/MPP-like metallohydrolase 8040300 3001831 SCOP2 (2022-06-29)
MSCOP2B SuperfamilyLuxS/MPP-like metallohydrolase 8040297 3001831 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyLuxS/MPP-like metallohydrolase 8040300 3001831 SCOP2B (2022-06-29)
DSCOP2 FamilyCytochrome bc1 domain 8027925 4000656 SCOP2 (2022-06-29)
DSCOP2 FamilyCytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 8027926 4002056 SCOP2 (2022-06-29)
DSCOP2 SuperfamilyCytochrome c 8040304 3000815 SCOP2 (2022-06-29)
DSCOP2 SuperfamilyCytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 8040305 3000762 SCOP2 (2022-06-29)
OSCOP2B SuperfamilyCytochrome c 8040304 3000815 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyCytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 8040305 3000762 SCOP2B (2022-06-29)
ESCOP2 FamilyRieske iron-sulfur protein (ISP) 8027928 4001667 SCOP2 (2022-06-29)
ESCOP2 FamilyISP transmembrane anchor 8027929 4002051 SCOP2 (2022-06-29)
ESCOP2 SuperfamilyISP domain 8040307 3000233 SCOP2 (2022-06-29)
ESCOP2 SuperfamilyISP transmembrane anchor 8040308 3000753 SCOP2 (2022-06-29)
PSCOP2B SuperfamilyISP transmembrane anchor 8040308 3000753 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyISP domain 8040307 3000233 SCOP2B (2022-06-29)
GSCOP2 Family14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8027936 4002070 SCOP2 (2022-06-29)
GSCOP2 Superfamily14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040315 3000797 SCOP2 (2022-06-29)
RSCOP2B Superfamily14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040315 3000797 SCOP2B (2022-06-29)
HSCOP2 FamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8027939 4002057 SCOP2 (2022-06-29)
HSCOP2 SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040318 3000770 SCOP2 (2022-06-29)
SSCOP2B SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040318 3000770 SCOP2B (2022-06-29)
ISCOP2 FamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8027940 4002059 SCOP2 (2022-06-29)
ISCOP2 SuperfamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040319 3000779 SCOP2 (2022-06-29)
TSCOP2B SuperfamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040319 3000779 SCOP2B (2022-06-29)
WSCOP2B SuperfamilyCytochrome c 8036427 3000815 SCOP2B (2022-06-29)
CSCOP2 Familya domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8027920 4002216 SCOP2 (2022-06-29)
CSCOP2 FamilyCytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8027923 4002208 SCOP2 (2022-06-29)
CSCOP2 Superfamilya domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040299 3000966 SCOP2 (2022-06-29)
CSCOP2 SuperfamilyTransmembrane di-heme cytochromes 8040302 3000517 SCOP2 (2022-06-29)
NSCOP2B Superfamilya domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040299 3000966 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyTransmembrane di-heme cytochromes 8040302 3000517 SCOP2B (2022-06-29)
FSCOP2 FamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8027933 4002082 SCOP2 (2022-06-29)
FSCOP2 SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040312 3000806 SCOP2 (2022-06-29)
QSCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040312 3000806 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APeptidase_M16_Ce3cx5A2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16_CECOD (1.6)
APeptidase_M16e3cx5A1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
LPeptidase_M16_Ce3cx5L2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16_CECOD (1.6)
LPeptidase_M16e3cx5L1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
BPeptidase_M16e3cx5B1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
BUNK_F_TYPEe3cx5B2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: UNK_F_TYPEECOD (1.6)
MPeptidase_M16e3cx5M1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
MUNK_F_TYPEe3cx5M2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: UNK_F_TYPEECOD (1.6)
DCytochrom_C1_Ne3cx5D1 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: Cytochrom_C1_NECOD (1.6)
DCytochrom_C1_Ce3cx5D2 A: extended segmentsX: cytochrome c1 transmembrane anchor (From Topology)H: cytochrome c1 transmembrane anchor (From Topology)T: cytochrome c1 transmembrane anchorF: Cytochrom_C1_CECOD (1.6)
OCytochrom_C1_Ne3cx5O1 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: Cytochrom_C1_NECOD (1.6)
OCytochrom_C1_Ce3cx5O2 A: extended segmentsX: cytochrome c1 transmembrane anchor (From Topology)H: cytochrome c1 transmembrane anchor (From Topology)T: cytochrome c1 transmembrane anchorF: Cytochrom_C1_CECOD (1.6)
ERieske_cytochrome_bc1e3cx5E1 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: Rieske_cytochrome_bc1ECOD (1.6)
ERieske_6e3cx5E3 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: Rieske_6ECOD (1.6)
EUCR_TMe3cx5E2 A: extended segmentsX: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)T: iron-sulfur subunit (ISP) transmembrane anchorF: UCR_TMECOD (1.6)
PRieske_cytochrome_bc1e3cx5P1 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: Rieske_cytochrome_bc1ECOD (1.6)
PRieske_6e3cx5P3 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: Rieske_6ECOD (1.6)
PUCR_TMe3cx5P2 A: extended segmentsX: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)T: iron-sulfur subunit (ISP) transmembrane anchorF: UCR_TMECOD (1.6)
GUCR_14kDe3cx5G1 A: alpha arraysX: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_14kDECOD (1.6)
RUCR_14kDe3cx5R1 A: alpha arraysX: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_14kDECOD (1.6)
HUcrQe3cx5H1 A: extended segmentsX: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UcrQECOD (1.6)
SUcrQe3cx5S1 A: extended segmentsX: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UcrQECOD (1.6)
IUCR_UQCRX_QCR9e3cx5I1 A: extended segmentsX: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_UQCRX_QCR9ECOD (1.6)
TUCR_UQCRX_QCR9e3cx5T1 A: extended segmentsX: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_UQCRX_QCR9ECOD (1.6)
JV-set_8e3cx5J1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_8ECOD (1.6)
UV-set_8e3cx5U1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_8ECOD (1.6)
KV-sete3cx5K1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-setECOD (1.6)
VV-sete3cx5V1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-setECOD (1.6)
WCytochrom_C_1e3cx5W1 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: Cytochrom_C_1ECOD (1.6)
CCytochrom_B_Ce3cx5C1 A: alpha bundlesX: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: Cytochrom_B_CECOD (1.6)
CCytochrome_Be3cx5C2 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: Cytochrome_BECOD (1.6)
NCytochrom_B_Ce3cx5N1 A: alpha bundlesX: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: Cytochrom_B_CECOD (1.6)
NCytochrome_Be3cx5N2 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: Cytochrome_BECOD (1.6)
FUCR_hingee3cx5F1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_hingeECOD (1.6)
QUCR_hingee3cx5Q1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_hingeECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.830.10 Alpha Beta 2-Layer Sandwich Cytochrome Bc1 Complex Chain A, domain 1CATH (4.3.0)
L3.30.830.10 Alpha Beta 2-Layer Sandwich Cytochrome Bc1 Complex Chain A, domain 1CATH (4.3.0)
B3.30.830.10 Alpha Beta 2-Layer Sandwich Cytochrome Bc1 Complex Chain A, domain 1CATH (4.3.0)
M3.30.830.10 Alpha Beta 2-Layer Sandwich Cytochrome Bc1 Complex Chain A, domain 1CATH (4.3.0)
D1.10.760.10 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex Chain D, domain 2CATH (4.3.0)
D1.20.5.100 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome c1, transmembrane anchor, C-terminalCATH (4.3.0)
O1.10.760.10 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex Chain D, domain 2CATH (4.3.0)
O1.20.5.100 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome c1, transmembrane anchor, C-terminalCATH (4.3.0)
E1.20.5.270 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Ubiquinol cytochrome reductase, transmembrane domainCATH (4.3.0)
E2.102.10.10 Mainly Beta 3-layer Sandwich Rieske Iron-sulfur Protein Rieske [2Fe-2S] iron-sulphur domainCATH (4.3.0)
P1.20.5.270 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Ubiquinol cytochrome reductase, transmembrane domainCATH (4.3.0)
P2.102.10.10 Mainly Beta 3-layer Sandwich Rieske Iron-sulfur Protein Rieske [2Fe-2S] iron-sulphur domainCATH (4.3.0)
G1.10.1090.10 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex Chain FCATH (4.3.0)
R1.10.1090.10 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex Chain FCATH (4.3.0)
H1.20.5.210 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome b-c1 complex subunit 8CATH (4.3.0)
S1.20.5.210 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome b-c1 complex subunit 8CATH (4.3.0)
I1.20.5.260 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome b-c1 complex subunit 9CATH (4.3.0)
T1.20.5.260 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome b-c1 complex subunit 9CATH (4.3.0)
J2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
U2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
K2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
V2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
W1.10.760.10 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex Chain D, domain 2CATH (4.3.0)
C1.20.810.10 Mainly Alpha Up-down Bundle Cytochrome Bc1 Complex Chain CCATH (4.3.0)
N1.20.810.10 Mainly Alpha Up-down Bundle Cytochrome Bc1 Complex Chain CCATH (4.3.0)
F1.10.287.20 Mainly Alpha Orthogonal Bundle Helix Hairpins Ubiquinol-cytochrome C reductase hinge domainCATH (4.3.0)
Q1.10.287.20 Mainly Alpha Orthogonal Bundle Helix Hairpins Ubiquinol-cytochrome C reductase hinge domainCATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
J, U
FV-FRAGMENT VH Mus musculus (house mouse) IGHV3-6*02, IGHV3-6*01, IGHJ4*01 V-DOMAIN VH IG FV-HEAVY_KAPPA IMGT (202444-0)
K, V
FV-FRAGMENT V-KAPPA Mus musculus (house mouse) IGKV10-94*03, IGKV10-96*03, IGKV10-94*04, IGKV10-94*06, IGKV10-96*04, IGKV10-94*05, IGKV10-94*08, IGKJ1*01 V-DOMAIN V-KAPPA IG FV-HEAVY_KAPPA IMGT (202444-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
J, U
Heavy ChainIGHV3 -cytochrome b-c1 complex subunit rieske, mitochondrialSAbDab (2024-11-08)
K, V
Light ChainIGKV10 Kappacytochrome b-c1 complex subunit rieske, mitochondrialSAbDab (2024-11-08)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, L
PF05193Peptidase M16 inactive domain (Peptidase_M16_C)Peptidase M16 inactive domainPeptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1].Domain
A, L
PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
B, M
PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
D, O
PF02167Cytochrome C1 family (Cytochrom_C1)Cytochrome C1 family- Family
E, P
PF02921Ubiquinol cytochrome reductase transmembrane region (UCR_TM)Ubiquinol cytochrome reductase transmembrane region- Family
E, P
PF00355Rieske [2Fe-2S] domain (Rieske)Rieske [2Fe-2S] domainThe rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ...The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in this motif form a disulphide bridge, which stabilises the protein [4].
Domain
G, R
PF02271Ubiquinol-cytochrome C reductase complex 14kD subunit (UCR_14kD)Ubiquinol-cytochrome C reductase complex 14kD subunit- Family
H, S
PF02939UcrQ family (UcrQ)UcrQ family- Family
I, T
PF05365Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like (UCR_UQCRX_QCR9)Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like- Family
PF00034Cytochrome c (Cytochrom_C)Cytochrome cThe Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included. All these are now in a new clan together. The C-terminus of DUF989, Pfam:PF06181, has now been merged into this family.Domain
C, N
PF00032Cytochrome b(C-terminal)/b6/petD (Cytochrom_B_C)Cytochrome b(C-terminal)/b6/petD- Domain
C, N
PF00033Cytochrome b/b6/petB (Cytochrome_B)Cytochrome b/b6/petB- Domain
F, Q
PF02320Ubiquinol-cytochrome C reductase hinge protein (UCR_hinge)Ubiquinol-cytochrome C reductase hinge protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, L
Cytochrome b-c1 complex subunit 1, mitochondrial
B, M
Cytochrome b-c1 complex subunit 2, mitochondrial
D, O
Cytochrome c1, heme protein, mitochondrial
E, P
Cytochrome b-c1 complex subunit Rieske, mitochondrial
G, R
Cytochrome b-c1 complex subunit 7-
H, S
Cytochrome b-c1 complex subunit 8
I, T
Cytochrome b-c1 complex subunit 9-
J, U
HEAVY CHAIN (VH) OF FV-FRAGMENT---
K, V
LIGHT CHAIN (VL) OF FV-FRAGMENT---
Cytochrome c iso-1
C, N
CYTOCHROME B
F, Q
Cytochrome b-c1 complex subunit 6-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, L
IPR007863Peptidase M16, C-terminalDomain
A, L
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
A, L
IPR050361Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase ComplexFamily
A, L
IPR011765Peptidase M16, N-terminalDomain
B, M
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
B, M
IPR050361Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase ComplexFamily
B, M
IPR011765Peptidase M16, N-terminalDomain
B, M
IPR001431Peptidase M16, zinc-binding siteBinding Site
D, O
IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
D, O
IPR002326Cytochrome c1Family
D, O
IPR009056Cytochrome c-like domainDomain
D, O
IPR021157Cytochrome c1, transmembrane anchor, C-terminalHomologous Superfamily
E, P
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
E, P
IPR014349Rieske iron-sulphur proteinFamily
E, P
IPR004192Cytochrome b-c1 complex subunit Rieske, transmembrane domainDomain
E, P
IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
E, P
IPR005805Rieske iron-sulphur protein, C-terminalDomain
E, P
IPR037008Cytochrome bc1 complex subunit Rieske, transmembrane domain superfamilyHomologous Superfamily
E, P
IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitDomain
G, R
IPR003197Cytochrome b-c1 complex subunit 7Family
G, R
IPR036544Cytochrome b-c1 complex subunit 7 superfamilyHomologous Superfamily
H, S
IPR004205Cytochrome b-c1 complex subunit 8Family
H, S
IPR036642Cytochrome b-c1 complex subunit 8 superfamilyHomologous Superfamily
I, T
IPR008027Cytochrome b-c1 complex subunit 9Family
I, T
IPR036656Cytochrome b-c1 complex subunit 9 superfamilyHomologous Superfamily
IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
IPR009056Cytochrome c-like domainDomain
IPR002327Cytochrome c, class IA/ IBFamily
C, N
IPR036150Cytochrome b/b6, C-terminal domain superfamilyHomologous Superfamily
C, N
IPR027387Cytochrome b/b6-like domain superfamilyHomologous Superfamily
C, N
IPR048260Cytochrome b/b6, C-terminal domain, eukaryotic/bacterialDomain
C, N
IPR016174Di-haem cytochrome, transmembraneHomologous Superfamily
C, N
IPR005798Cytochrome b/b6, C-terminalDomain
C, N
IPR048259Cytochrome b/b6, N-terminal domain, eukaryotic/bacterialDomain
C, N
IPR030689Cytochrome bFamily
C, N
IPR005797Cytochrome b/b6, N-terminal domainDomain
F, Q
IPR023184Ubiquinol-cytochrome C reductase hinge domainDomain
F, Q
IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilyHomologous Superfamily

Membrane Protein Annotation: OPM OPM Database Homepage

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, C, D, E
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

ChainsExternal LinkComment
A, B, C, D, E
MemProtMDAnnotated as membrane protein by MemProtMD

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
M3L Parent Component: LYS

RESIDAA0074

PSI-MOD :  N6,N6,N6-trimethyl-L-lysine MOD:00083