3L3O
Staphylococcal Complement Inhibitor (SCIN) in complex with Human Complement Component C3c
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth M] | SCOP2B Superfamily | Staphylococcal complement inhibitor (SCIN) -like | 8052481 | 3002121 | SCOP2B (2022-06-29) |
D [auth P] | SCOP2 Family | Staphylococcal complement inhibitor-like | 8046612 | 4005190 | SCOP2 (2022-06-29) |
D [auth P] | SCOP2 Superfamily | Staphylococcal complement inhibitor (SCIN) -like | 8052481 | 3002121 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
F [auth D] | A2M_N_1 | e3l3oD2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: A2M_N_1 | ECOD (1.6) |
F [auth D] | KOG1366_2nd_1 | e3l3oD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: KOG1366_2nd_1 | ECOD (1.6) |
F [auth D] | MG4 | e3l3oD4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: MG4 | ECOD (1.6) |
F [auth D] | KOG1366_1st | e3l3oD3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: KOG1366_1st | ECOD (1.6) |
F [auth D] | ANATO | e3l3oD5 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: ANATO | ECOD (1.6) |
F [auth D] | A2M_N_2 | e3l3oD6 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: A2M_N_2 | ECOD (1.6) |
A | A2M_N_1 | e3l3oA6 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: A2M_N_1 | ECOD (1.6) |
A | KOG1366_2nd_1 | e3l3oA3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: KOG1366_2nd_1 | ECOD (1.6) |
A | MG4 | e3l3oA4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: MG4 | ECOD (1.6) |
A | KOG1366_1st | e3l3oA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: KOG1366_1st | ECOD (1.6) |
A | ANATO | e3l3oA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: ANATO | ECOD (1.6) |
A | A2M_N_2 | e3l3oA5 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: A2M_N_2 | ECOD (1.6) |
H [auth E] | A2M_C | e3l3oE3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: A2M_C | ECOD (1.6) |
H [auth E] | A2M_N | e3l3oE2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: A2M_N | ECOD (1.6) |
B | A2M_C | e3l3oB3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: A2M_C | ECOD (1.6) |
B | A2M_N | e3l3oB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: A2M_N | ECOD (1.6) |
C [auth M] | CompInhib_SCIN | e3l3oM1 | A: alpha bundles | X: immunoglobulin/albumin-binding domain-like | H: Staphylococcal complement inhibitor (SCIN) (From Topology) | T: Staphylococcal complement inhibitor (SCIN) | F: CompInhib_SCIN | ECOD (1.6) |
D [auth P] | CompInhib_SCIN | e3l3oP1 | A: alpha bundles | X: immunoglobulin/albumin-binding domain-like | H: Staphylococcal complement inhibitor (SCIN) (From Topology) | T: Staphylococcal complement inhibitor (SCIN) | F: CompInhib_SCIN | ECOD (1.6) |
G [auth C] | NTR | e3l3oC1 | A: beta barrels | X: OB-fold | H: TIMP-like (From Topology) | T: TIMP-like | F: NTR | ECOD (1.6) |
G [auth C] | A2M_recep | e3l3oC2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: A2M_recep | ECOD (1.6) |
E [auth F] | NTR | e3l3oF1 | A: beta barrels | X: OB-fold | H: TIMP-like (From Topology) | T: TIMP-like | F: NTR | ECOD (1.6) |
E [auth F] | A2M_recep | e3l3oF2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: A2M_recep | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, F [auth D] | PF17790 | Macroglobulin domain MG1 (MG1) | Macroglobulin domain MG1 | This entry represents the N-terminal macroglobulin domain found in complement proteins C3, C4 and C5. | Domain |
A, F [auth D] | PF17791 | Macroglobulin domain MG3 (MG3) | Macroglobulin domain MG3 | This entry corresponds to the MG3 domain found in complement components C3, C4 and C5. | Domain |
A, F [auth D] | PF01835 | MG2 domain (MG2) | MG2 domain | This is the MG2 (macroglobulin) domain of alpha-2-macroglobulin in eukaryotes [1]. Alpha-2-macroglobulins (A2Ms) are plasma proteins that trap and inhibit a broad range of proteases and are major components of the eukaryotic innate immune system. How ... | Domain |
A, F [auth D] | PF07703 | Alpha-2-macroglobulin bait region domain (A2M_BRD) | Alpha-2-macroglobulin bait region domain | Alpha-2-macroglobulins (A2Ms) are plasma proteins that trap and inhibit a broad range of proteases and are major components of the eukaryotic innate immune system. However, A2M-like proteins were identified in pathogenically invasive bacteria and spe ... | Domain |
A, F [auth D] | PF17789 | Macroglobulin domain MG4 (MG4) | Macroglobulin domain MG4 | This domain is MG4 found in complement C3 and C5 proteins. | Domain |
B, H [auth E] | PF00207 | Alpha-2-macroglobulin family (A2M) | Alpha-2-macroglobulin family | - | Family |
E [auth F], G [auth C] | PF01759 | UNC-6/NTR/C345C module (NTR) | UNC-6/NTR/C345C module | Sequence similarity between netrin UNC-6 and C345C complement protein family members, and hence the existence of the UNC-6 module, was first reported in [1]. Subsequently, many additional members of the family were identified on the basis of sequence ... | Domain |
E [auth F], G [auth C] | PF07677 | A-macroglobulin receptor binding domain (A2M_recep) | A-macroglobulin receptor binding domain | This family includes the receptor binding domain region of the alpha-2-macroglobulin family. | Domain |