3MBH

Crystal structure of a putative phosphomethylpyrimidine kinase (BT_4458) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.00 A resolution (orthorhombic form with pyridoxal)


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APfkBe3mbhA1 A: a/b three-layered sandwichesX: Rossmann-likeH: Ribokinase-like (From Topology)T: Ribokinase-likeF: PfkBECOD (1.6)
BPfkBe3mbhB1 A: a/b three-layered sandwichesX: Rossmann-likeH: Ribokinase-like (From Topology)T: Ribokinase-likeF: PfkBECOD (1.6)
DPfkBe3mbhD1 A: a/b three-layered sandwichesX: Rossmann-likeH: Ribokinase-like (From Topology)T: Ribokinase-likeF: PfkBECOD (1.6)
FPfkBe3mbhF1 A: a/b three-layered sandwichesX: Rossmann-likeH: Ribokinase-like (From Topology)T: Ribokinase-likeF: PfkBECOD (1.6)
CPfkBe3mbhC1 A: a/b three-layered sandwichesX: Rossmann-likeH: Ribokinase-like (From Topology)T: Ribokinase-likeF: PfkBECOD (1.6)
EPfkBe3mbhE1 A: a/b three-layered sandwichesX: Rossmann-likeH: Ribokinase-like (From Topology)T: Ribokinase-likeF: PfkBECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF08543Phosphomethylpyrimidine kinase (Phos_pyr_kin)Phosphomethylpyrimidine kinase- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Putative phosphomethylpyrimidine kinase

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR004625Pyridoxine kinaseFamily
A, B, C, D, E
IPR029056Ribokinase-likeHomologous Superfamily
A, B, C, D, E
IPR013749Pyridoxamine kinase/Phosphomethylpyrimidine kinaseDomain