3MDB
Crystal structure of the ternary complex of full length centaurin alpha-1, KIF13B FHA domain, and IP4
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3mdba_ | All beta proteins | SMAD/FHA domain | SMAD/FHA domain | automated matches | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d3mdbb_ | All beta proteins | SMAD/FHA domain | SMAD/FHA domain | automated matches | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | FHA | e3mdbA1 | A: beta sandwiches | X: SMAD/FHA domain (From Topology) | H: SMAD/FHA domain (From Topology) | T: SMAD/FHA domain | F: FHA | ECOD (1.6) |
B | FHA | e3mdbB1 | A: beta sandwiches | X: SMAD/FHA domain (From Topology) | H: SMAD/FHA domain (From Topology) | T: SMAD/FHA domain | F: FHA | ECOD (1.6) |
C | PH | e3mdbC2 | A: beta barrels | X: PH domain-like | H: PH domain-like (From Topology) | T: PH domain-like | F: PH | ECOD (1.6) |
C | ArfGap | e3mdbC1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: ArfGap | ECOD (1.6) |
D | PH | e3mdbD5 | A: beta barrels | X: PH domain-like | H: PH domain-like (From Topology) | T: PH domain-like | F: PH | ECOD (1.6) |
D | ArfGap | e3mdbD1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: ArfGap | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.200.20 | Mainly Beta | Sandwich | Tumour Suppressor Smad4 | CATH (4.3.0) | |
B | 2.60.200.20 | Mainly Beta | Sandwich | Tumour Suppressor Smad4 | CATH (4.3.0) | |
C | 1.10.220.150 | Mainly Alpha | Orthogonal Bundle | Annexin V | domain 1 | CATH (4.3.0) |
C | 2.30.29.30 | Mainly Beta | Roll | PH-domain like | Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | CATH (4.3.0) |
D | 1.10.220.150 | Mainly Alpha | Orthogonal Bundle | Annexin V | domain 1 | CATH (4.3.0) |
D | 2.30.29.30 | Mainly Beta | Roll | PH-domain like | Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00498 | FHA domain (FHA) | FHA domain | - | Family | |
PF00169 | PH domain (PH) | PH domain | PH stands for pleckstrin homology. | Domain | |
PF01412 | Putative GTPase activating protein for Arf (ArfGap) | Putative GTPase activating protein for Arf | Putative zinc fingers with GTPase activating proteins (GAPs) towards the small GTPase, Arf. The GAP of ARD1 stimulates GTPase hydrolysis for ARD1 but not ARFs. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036961 | Kinesin motor domain superfamily | Homologous Superfamily | |
IPR001752 | Kinesin motor domain | Domain | |
IPR000938 | CAP Gly-rich domain | Domain | |
IPR032405 | Kinesin-associated | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR022164 | Kinesin-like | Domain | |
IPR036859 | CAP Gly-rich domain superfamily | Homologous Superfamily | |
IPR008984 | SMAD/FHA domain superfamily | Homologous Superfamily | |
IPR000253 | Forkhead-associated (FHA) domain | Domain | |
IPR022140 | Kinesin-like KIF1-type | Domain | |
IPR019821 | Kinesin motor domain, conserved site | Conserved Site | |
IPR001849 | Pleckstrin homology domain | Domain | |
IPR037849 | ADAP, PH domain 1 | Domain | |
IPR037851 | ADAP, PH domain 2 | Domain | |
IPR037278 | ARFGAP/RecO-like zinc finger | Homologous Superfamily | |
IPR011993 | PH-like domain superfamily | Homologous Superfamily | |
IPR052589 | Arf-GAP with dual PH domain-containing protein | Family | |
IPR001164 | Arf GTPase activating protein | Domain | |
IPR038508 | ArfGAP domain superfamily | Homologous Superfamily |