Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyYicI C-terminal domain-like 8051884 3000267 SCOP2B (2022-06-29)
ASCOP2B Superfamilygalactose-binding domain-like 8051883 3000087 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyAlpha-L-rhamnosidase associated domain -like 8051887 3002069 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyAlpha-L-rhamnosidase associated domain -like 8051885 3002069 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyE set domains 8051889 3000070 SCOP2B (2022-06-29)
ASCOP2B SuperfamilySix-hairpin glycosidases 8051882 3000970 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ABac_rhamnosid_Ne3w5mA3 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Galactose-binding domain-likeF: Bac_rhamnosid_NECOD (1.6)
ABac_rhamnoside3w5mA8 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Galactose-binding domain-likeF: Bac_rhamnosidECOD (1.6)
Afn3_7e3w5mA5 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: fn3_7ECOD (1.6)
ABac_rhamnosid_Ce3w5mA7 A: beta sandwichesX: Glycosyl hydrolase domain-likeH: Glycoside hydrolase family 127 middle domain-related (From Topology)T: Glycoside hydrolase family 127 middle domain-relatedF: Bac_rhamnosid_CECOD (1.6)
ABac_rhamnosid6He3w5mA6 A: alpha superhelicesX: Repetitive alpha hairpinsH: alpha/alpha toroid (From Topology)T: alpha/alpha toroidF: Bac_rhamnosid6HECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
A2.60.120.260 Mainly Beta Sandwich Jelly Rolls Galactose-binding domain-likeCATH (4.3.0)
A1.50.10.10 Mainly Alpha Alpha/alpha barrel Glycosyltransferase CATH (4.3.0)
A2.60.420.10 Mainly Beta Sandwich Maltose phosphorylase, domain 3 Maltose phosphorylase, domain 3CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF05592Bacterial alpha-L-rhamnosidase concanavalin-like domain (Bac_rhamnosid)Bacterial alpha-L-rhamnosidase concanavalin-like domainThis family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are impo ...This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria [1].
Domain
PF08531Alpha-L-rhamnosidase N-terminal domain (Bac_rhamnosid_N)Alpha-L-rhamnosidase N-terminal domainThis family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.Domain
PF17389Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain (Bac_rhamnosid6H)Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain- Repeat
PF17390Bacterial alpha-L-rhamnosidase C-terminal domain (Bac_rhamnosid_C)Bacterial alpha-L-rhamnosidase C-terminal domainThis family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are impo ...This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria [1].
Domain