4NVM
Predicting protein conformational response in prospective ligand discovery
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | d4nvmb_ | All alpha proteins | Heme-dependent peroxidases | Heme-dependent peroxidases | CCP-like | Cytochrome c peroxidase, CCP | Baker's yeast (Saccharomyces cerevisiae RM11-1a ) [TaxId: 285006 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | peroxidase | e4nvmB1 | A: alpha complex topology | X: Heme-dependent peroxidases (From Topology) | H: Heme-dependent peroxidases (From Topology) | T: Heme-dependent peroxidases | F: peroxidase | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth B] | 1.10.520.10 | Mainly Alpha | Orthogonal Bundle | Peroxidase | domain 1 | CATH (4.3.0) |
A [auth B] | 1.10.420.10 | Mainly Alpha | Orthogonal Bundle | Peroxidase | domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B] | PF00141 | Peroxidase (peroxidase) | Peroxidase | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth B] | Cytochrome c peroxidase |
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InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B] | IPR010255 | Haem peroxidase superfamily | Homologous Superfamily |
A [auth B] | IPR002207 | Class I peroxidase | Family |
A [auth B] | IPR044831 | Heme-binding peroxidase Ccp1-like | Family |
A [auth B] | IPR002016 | Haem peroxidase | Domain |
A [auth B] | IPR019794 | Peroxidase, active site | Active Site |
A [auth B] | IPR019793 | Peroxidases heam-ligand binding site | Binding Site |