Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
A [auth H]d4u6vh_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
D [auth K]d4u6vk_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
B [auth L]d4u6vl2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
B [auth L]d4u6vl1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
E [auth M]d4u6vm2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
E [auth M]d4u6vm1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
C [auth A]d4u6va_ Membrane and cell surface proteins and peptides Leukocidin-like Leukocidin-like Leukocidin (pore-forming toxin) Alpha-hemolysin (Staphylococcus aureus subsp. aureus TCH60 ) [TaxId: 548473 ], SCOPe (2.08)
F [auth B]d4u6vb_ Membrane and cell surface proteins and peptides Leukocidin-like Leukocidin-like Leukocidin (pore-forming toxin) Alpha-hemolysin (Staphylococcus aureus subsp. aureus TCH60 ) [TaxId: 548473 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth H]V-set_8e4u6vH1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_8ECOD (1.6)
A [auth H]C1-set_1e4u6vH2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_1ECOD (1.6)
D [auth K]V-set_8e4u6vK1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_8ECOD (1.6)
D [auth K]C1-set_1e4u6vK2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_1ECOD (1.6)
B [auth L]C1-set_4e4u6vL1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_4ECOD (1.6)
B [auth L]V-sete4u6vL2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-setECOD (1.6)
E [auth M]C1-set_4e4u6vM1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_4ECOD (1.6)
E [auth M]V-sete4u6vM2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-setECOD (1.6)
C [auth A]Leukocidine4u6vA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Leukocidin-like (From Topology)T: Leukocidin-likeF: LeukocidinECOD (1.6)
F [auth B]Leukocidine4u6vB1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Leukocidin-like (From Topology)T: Leukocidin-likeF: LeukocidinECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
A [auth H],
D [auth K]
FAB, ANTIGEN BINDING FRAGMENT, HEAVY CHAIN VH-CH1 Homo sapiens (human) IGHV3-13*01, IGHV3-13*04, IGHJ6*01, IGHJ6*02, IGHG1*03 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-1_KAPPA IMGT (202450-0)
B [auth L],
E [auth M]
FAB, ANTIGEN BINDING FRAGMENT, HEAVY CHAIN L-KAPPA Homo sapiens (human) IGKV1-5*03, IGKJ1*01, IGKC*01 V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA IG FAB-GAMMA-1_KAPPA IMGT (202450-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
A [auth H],
D [auth K]
Heavy ChainIGHV3 -alpha-hemolysinSAbDab (2024-12-20)
B [auth L],
E [auth M]
Light ChainIGKV1 Kappaalpha-hemolysinSAbDab (2024-12-20)

Thera-SAbDab Antibody Annotation Thera-SAbDab Database Homepage

ChainNameTargetProvenance Source
A [auth H],
D [auth K]
Suvratoxumab Staphylococcus aureus Toxin ATherapeutic SAbDab (2024-12-20)
B [auth L],
E [auth M]
Suvratoxumab Staphylococcus aureus Toxin ATherapeutic SAbDab (2024-12-20)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth A],
F [auth B]
PF07968Leukocidin/Hemolysin toxin family (Leukocidin)Leukocidin/Hemolysin toxin family- Domain