6Y5Z
Structure of apo Human Polyomavirus 12 VP1
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth AAA] | SCOP2B Superfamily | Group I dsDNA viruses | 8098072 | 3000939 | SCOP2B (2022-06-29) |
B [auth BBB] | SCOP2B Superfamily | Group I dsDNA viruses | 8098072 | 3000939 | SCOP2B (2022-06-29) |
C [auth CCC] | SCOP2B Superfamily | Group I dsDNA viruses | 8098072 | 3000939 | SCOP2B (2022-06-29) |
D [auth DDD] | SCOP2 Family | papovaviridae-like vp | 8098071 | 4003485 | SCOP2 (2022-06-29) |
D [auth DDD] | SCOP2 Superfamily | Group I dsDNA viruses | 8098072 | 3000939 | SCOP2 (2022-06-29) |
E [auth EEE] | SCOP2B Superfamily | Group I dsDNA viruses | 8098072 | 3000939 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth AAA] | Polyoma_coat | e6y5zAAA1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Polyoma_coat | ECOD (1.6) |
B [auth BBB] | Polyoma_coat | e6y5zBBB1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Polyoma_coat | ECOD (1.6) |
C [auth CCC] | Polyoma_coat | e6y5zCCC1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Polyoma_coat | ECOD (1.6) |
D [auth DDD] | Polyoma_coat | e6y5zDDD1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Polyoma_coat | ECOD (1.6) |
E [auth EEE] | Polyoma_coat | e6y5zEEE1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Polyoma_coat | ECOD (1.6) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth EEE] | Capsid protein VP1 |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth EEE] | IPR011222 | Double-stranded DNA virus, group I, capsid | Homologous Superfamily |
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth EEE] | IPR000662 | Capsid protein VP1,Polyomavirus | Family |
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth EEE] | IPR036931 | Polyomavirus capsid protein VP1 superfamily | Homologous Superfamily |