7PJU

Structure of the 70S ribosome with tRNAs in hybrid state 2 (H2)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth 0]SCOP2B SuperfamilyZn-binding ribosomal proteins8096380 3001320 SCOP2B (2022-06-29)
L [auth E]SCOP2 FamilyRibosomal protein L48105741 4003628 SCOP2 (2022-06-29)
L [auth E]SCOP2 SuperfamilyRibosomal protein L48105742 3001146 SCOP2 (2022-06-29)
M [auth F]SCOP2 FamilyRibosomal protein L58105743 4001498 SCOP2 (2022-06-29)
M [auth F]SCOP2 SuperfamilyRL5-like8105744 3001709 SCOP2 (2022-06-29)
Q [auth J]SCOP2 FamilyRibosomal protein L138105735 4003623 SCOP2 (2022-06-29)
Q [auth J]SCOP2 SuperfamilyRibosomal protein L138105736 3001134 SCOP2 (2022-06-29)
R [auth K]SCOP2 FamilyRibosomal protein L148105753 4001826 SCOP2 (2022-06-29)
R [auth K]SCOP2 Superfamily50S Ribosomal protein L14-like8105754 3000433 SCOP2 (2022-06-29)
S [auth L]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8096018 3001045 SCOP2B (2022-06-29)
B [auth 1]SCOP2B SuperfamilyZn-binding ribosomal proteins8096362 3001320 SCOP2B (2022-06-29)
U [auth N]SCOP2 FamilyProkaryotic ribosomal protein L178105737 4003526 SCOP2 (2022-06-29)
U [auth N]SCOP2 SuperfamilyProkaryotic ribosomal protein L178105738 3000995 SCOP2 (2022-06-29)
Y [auth R]SCOP2 FamilyRibosomal protein l21p8105733 4001630 SCOP2 (2022-06-29)
Y [auth R]SCOP2 Superfamilyl21p-like8105734 3002005 SCOP2 (2022-06-29)
Z [auth S]SCOP2 FamilyRibosomal protein L228105671 4001212 SCOP2 (2022-06-29)
Z [auth S]SCOP2 SuperfamilyRibosomal protein L228105672 3001078 SCOP2 (2022-06-29)
AA [auth T]SCOP2 FamilyL23p8105747 4000943 SCOP2 (2022-06-29)
AA [auth T]SCOP2 SuperfamilyRibosomal proteins S24e L23 and L15e8105748 3000210 SCOP2 (2022-06-29)
BA [auth U]SCOP2 FamilyRibosomal proteins L24p and L21e8105673 4001752 SCOP2 (2022-06-29)
BA [auth U]SCOP2 SuperfamilyTranslation proteins SH3-like KOW motif containing domain8105674 3000334 SCOP2 (2022-06-29)
EA [auth X]SCOP2 FamilyRibosomal protein L288105607 4003961 SCOP2 (2022-06-29)
EA [auth X]SCOP2 SuperfamilyL28p-like8105608 3001966 SCOP2 (2022-06-29)
GA [auth Z]SCOP2 FamilyRibosomal protein L30p/L7e8105957 4001360 SCOP2 (2022-06-29)
GA [auth Z]SCOP2 SuperfamilyRibosomal protein L30p/L7e8105958 3001378 SCOP2 (2022-06-29)
KA [auth d]SCOP2 FamilyRibosomal protein S48105675 4001399 SCOP2 (2022-06-29)
KA [auth d]SCOP2 SuperfamilyAlpha-L RNA-binding motif8105676 3001473 SCOP2 (2022-06-29)
MA [auth f]SCOP2B SuperfamilyRibosomal protein S68066495 3001323 SCOP2B (2022-06-29)
D [auth 3]SCOP2B SuperfamilyL35p-like8035388 3000790 SCOP2B (2022-06-29)
NA [auth g]SCOP2 FamilyRibosomal protein S78105611 4001112 SCOP2 (2022-06-29)
NA [auth g]SCOP2 SuperfamilyRibosomal protein S78105612 3000799 SCOP2 (2022-06-29)
OA [auth h]SCOP2B SuperfamilyRibosomal protein S88095385 3000709 SCOP2B (2022-06-29)
SA [auth l]SCOP2 FamilyCold shock DNA-binding domain-like8105965 4001909 SCOP2 (2022-06-29)
SA [auth l]SCOP2 SuperfamilyNucleic acid-binding proteins8105966 3000135 SCOP2 (2022-06-29)
TA [auth m]SCOP2 FamilyRibosomal protein S138105723 4000260 SCOP2 (2022-06-29)
TA [auth m]SCOP2 SuperfamilyS13-like H2TH domain8105724 3000053 SCOP2 (2022-06-29)
VA [auth o]SCOP2 Family30S Ribosomal protein S15 / 40S Ribosomal protein S138105677 4000767 SCOP2 (2022-06-29)
VA [auth o]SCOP2 SuperfamilyS15/NS1 RNA-binding domain8105678 3001284 SCOP2 (2022-06-29)
WA [auth p]SCOP2 FamilyRibosomal protein S168105609 4001077 SCOP2 (2022-06-29)
WA [auth p]SCOP2 SuperfamilyRibosomal protein S168105610 3000680 SCOP2 (2022-06-29)
E [auth 4]SCOP2B SuperfamilyRibosomal protein L368035391 3001346 SCOP2B (2022-06-29)
XA [auth q]SCOP2 FamilyCold shock DNA-binding domain-like8105745 4001909 SCOP2 (2022-06-29)
XA [auth q]SCOP2 SuperfamilyNucleic acid-binding proteins8105746 3000135 SCOP2 (2022-06-29)
ZA [auth s]SCOP2 FamilyRibosomal protein S198105585 4001081 SCOP2 (2022-06-29)
ZA [auth s]SCOP2 SuperfamilyRibosomal protein S198105586 3000686 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth 0]PF01783e7pju01 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01783ECOD (1.6)
J [auth C]PF00181e7pjuC2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
J [auth C]PF03947e7pjuC1 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
K [auth D]PF00297e7pjuD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
L [auth E]PF00573e7pjuE1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
M [auth F]PF00281,PF00673e7pjuF1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
N [auth G]PF00347e7pjuG2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
O [auth H]PF01281e7pjuH2 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: PF01281ECOD (1.6)
O [auth H]PF03948e7pjuH1 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: PF03948ECOD (1.6)
P [auth I]PF00298e7pjuI2 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: PF00298ECOD (1.6)
P [auth I]PF03946e7pjuI1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: PF03946ECOD (1.6)
Q [auth J]PF00572e7pjuJ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
R [auth K]PF00238e7pjuK1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
S [auth L]PF00828e7pjuL1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
B [auth 1]PF00471e7pju11 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00471ECOD (1.6)
T [auth M]PF00252e7pjuM1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
U [auth N]PF01196e7pjuN1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: PF01196ECOD (1.6)
V [auth O]PF00861e7pjuO1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00861ECOD (1.6)
W [auth P]PF01245e7pjuP1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01245ECOD (1.6)
X [auth Q]PF00453e7pjuQ1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: PF00453ECOD (1.6)
Y [auth R]PF00829e7pjuR1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: PF00829ECOD (1.6)
Z [auth S]PF00237e7pjuS1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
AA [auth T]PF00276e7pjuT1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276ECOD (1.6)
BA [auth U]PF00467,PF17136e7pjuU1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF17136ECOD (1.6)
CA [auth V]PF01386e7pjuV1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01386ECOD (1.6)
C [auth 2]PF00468e7pju21 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: PF00468ECOD (1.6)
DA [auth W]PF01016e7pjuW1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: PF01016ECOD (1.6)
EA [auth X]PF00830e7pjuX1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: PF00830ECOD (1.6)
FA [auth Y]PF00831e7pjuY1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
GA [auth Z]PF00327e7pjuZ1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327ECOD (1.6)
IA [auth b]PF00318e7pjub1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
JA [auth c]PF00189e7pjuc1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
JA [auth c]PF07650e7pjuc2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
KA [auth d]PF00163,PF01479e7pjud1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)
LA [auth e]PF03719e7pjue1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
LA [auth e]PF00333e7pjue2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
MA [auth f]PF01250e7pjuf1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: PF01250ECOD (1.6)
D [auth 3]PF01632e7pju31 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: PF01632ECOD (1.6)
NA [auth g]PF00177e7pjug1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
OA [auth h]PF00410e7pjuh2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
OA [auth h]PF00410e7pjuh1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
PA [auth i]PF00380e7pjui1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
QA [auth j]PF00338e7pjuj1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
RA [auth k]PF00411e7pjuk1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
SA [auth l]PF00164e7pjul1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
TA [auth m]PF00416e7pjum1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
UA [auth n]PF00253e7pjun1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
VA [auth o]PF00312e7pjuo1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
WA [auth p]PF00886e7pjup1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: PF00886ECOD (1.6)
E [auth 4]PF00444e7pju41 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: PF00444ECOD (1.6)
XA [auth q]PF00366e7pjuq1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366ECOD (1.6)
YA [auth r]PF01084e7pjur1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
ZA [auth s]PF00203e7pjus1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
AB [auth t]PF01649e7pjut1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: PF01649ECOD (1.6)
BB [auth u]PF01165e7pjuu1 A: extended segmentsX: 30S ribosomal protein S21 (From Topology)H: 30S ribosomal protein S21 (From Topology)T: 30S ribosomal protein S21F: PF01165ECOD (1.6)
F [auth 5]PF00466e7pju51 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: PF00466ECOD (1.6)
G [auth 6]PF01197e7pju61 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: PF01197ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth 0]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
L [auth E]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
M [auth F]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
M [auth F]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
P [auth I]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
P [auth I]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
Q [auth J]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
S [auth L]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
B [auth 1]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
U [auth N]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
Y [auth R]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
Z [auth S]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
AA [auth T]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
BA [auth U]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
BA [auth U]PF00467KOW motif (KOW)KOW motif- Family
C [auth 2]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
EA [auth X]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
GA [auth Z]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
JA [auth c]PF07650KH domain (KH_2)KH domain- Domain
JA [auth c]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
KA [auth d]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
KA [auth d]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
LA [auth e]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
LA [auth e]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
MA [auth f]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
D [auth 3]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
OA [auth h]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
SA [auth l]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
TA [auth m]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
VA [auth o]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
WA [auth p]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
E [auth 4]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
XA [auth q]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
ZA [auth s]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
G [auth 6]PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 0]50S ribosomal protein L32
J [auth C]50S ribosomal protein L2---
K [auth D]50S ribosomal protein L3---
L [auth E]50S ribosomal protein L4
M [auth F]50S ribosomal protein L5
N [auth G]50S ribosomal protein L6---
O [auth H]50S ribosomal protein L9---
P [auth I]Ribosomal protein L11
Q [auth J]50S ribosomal protein L13
R [auth K]50S ribosomal protein L14---
S [auth L]50S ribosomal protein L15
B [auth 1]50S ribosomal protein L33
T [auth M]50S ribosomal protein L16---
U [auth N]50S ribosomal protein L17---
V [auth O]50S ribosomal protein L18---
W [auth P]50S ribosomal protein L19---
X [auth Q]50S ribosomal protein L20---
Y [auth R]50S ribosomal protein L21---
Z [auth S]Ribosomal protein L22---
AA [auth T]50S ribosomal protein L23
BA [auth U]Ribosomal protein L24---
CA [auth V]50S ribosomal protein L25---
C [auth 2]50S ribosomal protein L34
DA [auth W]50S ribosomal protein L27---
EA [auth X]50S ribosomal protein L28
FA [auth Y]50S ribosomal protein L29---
GA [auth Z]50S ribosomal protein L30---
HA [auth a]16S ribosomal RNA---
IA [auth b]30S ribosomal protein S2---
JA [auth c]30S ribosomal protein S3---
KA [auth d]Ribosomal protein S4---
LA [auth e]30S ribosomal protein S5---
MA [auth f]30S ribosomal protein S6, fully modified isoform
D [auth 3]50S ribosomal protein L35
NA [auth g]30S ribosomal protein S7---
OA [auth h]30S ribosomal protein S8
PA [auth i]30S ribosomal protein S9---
QA [auth j]30S ribosomal protein S10---
RA [auth k]30S ribosomal protein S11---
SA [auth l]30S ribosomal protein S12---
TA [auth m]30S ribosomal protein S13
UA [auth n]30S ribosomal protein S14---
VA [auth o]30S ribosomal protein S15
WA [auth p]30S ribosomal protein S16
E [auth 4]50S ribosomal protein L36
XA [auth q]30S ribosomal protein S17
YA [auth r]30S ribosomal protein S18---
ZA [auth s]30S ribosomal protein S19---
AB [auth t]30S ribosomal protein S20---
BB [auth u]30S ribosomal protein S21---
CB [auth v]P-site tRNA(fMet)---
DB [auth w]P-site fMet-Phe-tRNA(Phe)---
EB [auth y]Dipeptide (FME-PHE)---
FB [auth z]mRNA---
F [auth 5]50S ribosomal protein L10---
G [auth 6]50S ribosomal protein L31---
H [auth A]23S ribosomal RNA---
I [auth B]5S ribosomal RNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth 0]IPR002677Large ribosomal subunit protein bL32Family
A [auth 0]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
A [auth 0]IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
L [auth E]IPR013005Large ribosomal subunit protein uL4-likeFamily
L [auth E]IPR002136Large ribosomal subunit protein uL4Family
L [auth E]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
M [auth F]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
M [auth F]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
M [auth F]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
M [auth F]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
M [auth F]IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
M [auth F]IPR002132Large ribosomal subunit protein uL5Family
P [auth I]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
P [auth I]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
P [auth I]IPR000911Ribosomal protein uL11Family
P [auth I]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
P [auth I]IPR006519Large ribosomal subunit protein uL11, bacterial-typeFamily
P [auth I]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
P [auth I]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
Q [auth J]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
Q [auth J]IPR005822Large ribosomal subunit protein uL13Family
Q [auth J]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
Q [auth J]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
S [auth L]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
S [auth L]IPR021131Large ribosomal subunit protein uL15/eL18Domain
S [auth L]IPR030878Large ribosomal subunit protein uL15Family
S [auth L]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
S [auth L]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
B [auth 1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
B [auth 1]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
B [auth 1]IPR001705Large ribosomal subunit protein bL33Family
B [auth 1]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
AA [auth T]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
AA [auth T]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
AA [auth T]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
AA [auth T]IPR013025Large ribosomal subunit protein uL23-likeFamily
C [auth 2]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
C [auth 2]IPR000271Large ribosomal subunit protein bL34Family
EA [auth X]IPR001383Large ribosomal subunit protein bL28, bacterial-typeFamily
EA [auth X]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
EA [auth X]IPR026569Large ribosomal subunit protein bL28Family
EA [auth X]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
MA [auth f]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
MA [auth f]IPR000529Small ribosomal subunit protein bS6Family
MA [auth f]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
MA [auth f]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
MA [auth f]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
D [auth 3]IPR021137Large ribosomal subunit protein bL35-likeFamily
D [auth 3]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
D [auth 3]IPR001706Large ribosomal subunit protein bL35Family
D [auth 3]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
OA [auth h]IPR000630Small ribosomal subunit protein uS8Family
OA [auth h]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
OA [auth h]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
TA [auth m]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
TA [auth m]IPR001892Small ribosomal subunit protein uS13Family
TA [auth m]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
TA [auth m]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
TA [auth m]IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
VA [auth o]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
VA [auth o]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
VA [auth o]IPR000589Small ribosomal subunit protein uS15Family
WA [auth p]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
WA [auth p]IPR000307Small ribosomal subunit protein bS16Family
WA [auth p]IPR020592Small ribosomal subunit protein bS16, conserved siteConserved Site
E [auth 4]IPR000473Large ribosomal subunit protein bL36Family
E [auth 4]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
XA [auth q]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
XA [auth q]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
XA [auth q]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
XA [auth q]IPR000266Small ribosomal subunit protein uS17Family

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
HA [auth a]2MG Parent Component: G

HA [auth a]4OC Parent Component: C

HA [auth a]5MC Parent Component: C

HA [auth a]G7M Parent Component: G

HA [auth a]MA6 Parent Component: A

HA [auth a]PSU Parent Component: U

HA [auth a]UR3 Parent Component: U

CB [auth v]4SU Parent Component: U

CB [auth v]5MU Parent Component: U

CB [auth v]H2U Parent Component: U

CB [auth v]PSU Parent Component: U

DB [auth w]4SU Parent Component: U

DB [auth w]5MU Parent Component: U

DB [auth w]G7M Parent Component: G

DB [auth w]MIA Parent Component: A

DB [auth w]PSU Parent Component: U

EB [auth y]FME Parent Component: MET

RESIDAA0021 , AA0566

PSI-MOD :  N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891
H [auth A]1MG Parent Component: G

RESIDAA0021 , AA0566

H [auth A]2MA Parent Component: A

RESIDAA0021 , AA0566

H [auth A]2MG Parent Component: G

RESIDAA0021 , AA0566

H [auth A]3TD Parent Component: U

RESIDAA0021 , AA0566

H [auth A]5MC Parent Component: C

RESIDAA0021 , AA0566

H [auth A]5MU Parent Component: U

RESIDAA0021 , AA0566

H [auth A]6MZ Parent Component: A

RESIDAA0021 , AA0566

H [auth A]G7M Parent Component: G

RESIDAA0021 , AA0566

H [auth A]OMC Parent Component: C

RESIDAA0021 , AA0566

H [auth A]OMG Parent Component: G

RESIDAA0021 , AA0566

H [auth A]OMU Parent Component: U

RESIDAA0021 , AA0566

H [auth A]PSU Parent Component: U

RESIDAA0021 , AA0566