8IC5

Respiratory complex CIII2, focus-refined of type I, PERK -/- mouse under cold temperature


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
K [auth AK]SCOP2B SuperfamilySubunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8105493 3000787 SCOP2B (2022-06-29)
U [auth Ak]SCOP2B SuperfamilySubunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8105493 3000787 SCOP2B (2022-06-29)
Q [auth Af]SCOP2B Superfamily14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8105497 3000797 SCOP2B (2022-06-29)
F [auth AF]SCOP2B Superfamily14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8105497 3000797 SCOP2B (2022-06-29)
R [auth Ag]SCOP2B SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8105495 3000770 SCOP2B (2022-06-29)
G [auth AG]SCOP2B SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8105495 3000770 SCOP2B (2022-06-29)
H [auth AH]SCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8105459 3000806 SCOP2B (2022-06-29)
S [auth Ah]SCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8105459 3000806 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth AA],
L [auth Aa]
PF05193Peptidase M16 inactive domain (Peptidase_M16_C)Peptidase M16 inactive domainPeptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1].Domain
A [auth AA],
L [auth Aa]
PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
B [auth AB],
M [auth Ab]
PF05193Peptidase M16 inactive domain (Peptidase_M16_C)Peptidase M16 inactive domainPeptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1].Domain
B [auth AB],
M [auth Ab]
PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
C [auth AC],
N [auth Ac]
PF00032Cytochrome b(C-terminal)/b6/petD (Cytochrom_B_C)Cytochrome b(C-terminal)/b6/petD- Domain
C [auth AC],
N [auth Ac]
PF00033Cytochrome b/b6/petB (Cytochrome_B)Cytochrome b/b6/petB- Domain
D [auth AD],
O [auth Ad]
PF02167Cytochrome C1 family (Cytochrom_C1)Cytochrome C1 family- Family
E [auth AE],
I [auth AI],
P [auth Ae]
PF02921Ubiquinol cytochrome reductase transmembrane region (UCR_TM)Ubiquinol cytochrome reductase transmembrane region- Family
E [auth AE],
I [auth AI],
P [auth Ae]
PF00355Rieske [2Fe-2S] domain (Rieske)Rieske [2Fe-2S] domainThe rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ...The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in this motif form a disulphide bridge, which stabilises the protein [4].
Domain
G [auth AG],
R [auth Ag]
PF02939UcrQ family (UcrQ)UcrQ family- Family
H [auth AH],
S [auth Ah]
PF02320Ubiquinol-cytochrome C reductase hinge protein (UCR_hinge)Ubiquinol-cytochrome C reductase hinge protein- Family
J [auth AJ],
T [auth Aj]
PF05365Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like (UCR_UQCRX_QCR9)Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth AA],
L [auth Aa]
Cytochrome b-c1 complex subunit 1, mitochondrial
K [auth AK],
U [auth Ak]
Cytochrome b-c1 complex subunit 10-
B [auth AB],
M [auth Ab]
Cytochrome b-c1 complex subunit 2, mitochondrial
C [auth AC],
N [auth Ac]
Cytochrome b
D [auth AD],
O [auth Ad]
Cytochrome c1, heme protein, mitochondrial
E [auth AE],
I [auth AI],
P [auth Ae]
Cytochrome b-c1 complex subunit Rieske, mitochondrial
F [auth AF],
Q [auth Af]
Cytochrome b-c1 complex subunit 7-
G [auth AG],
R [auth Ag]
Cytochrome b-c1 complex subunit 8-
H [auth AH],
S [auth Ah]
Cytochrome b-c1 complex subunit 6, mitochondrial
J [auth AJ],
T [auth Aj]
Cytochrome b-c1 complex subunit 9-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth AA],
L [auth Aa]
IPR007863Peptidase M16, C-terminalDomain
A [auth AA],
L [auth Aa]
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
A [auth AA],
L [auth Aa]
IPR050361Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase ComplexFamily
A [auth AA],
L [auth Aa]
IPR011765Peptidase M16, N-terminalDomain
K [auth AK],
U [auth Ak]
IPR029027Single alpha-helix domain superfamilyHomologous Superfamily
K [auth AK],
U [auth Ak]
IPR015089Cytochrome b-c1 complex subunit 10Family
B [auth AB],
M [auth Ab]
IPR007863Peptidase M16, C-terminalDomain
B [auth AB],
M [auth Ab]
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
B [auth AB],
M [auth Ab]
IPR050361Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase ComplexFamily
B [auth AB],
M [auth Ab]
IPR011765Peptidase M16, N-terminalDomain
B [auth AB],
M [auth Ab]
IPR001431Peptidase M16, zinc-binding siteBinding Site
C [auth AC],
N [auth Ac]
IPR036150Cytochrome b/b6, C-terminal domain superfamilyHomologous Superfamily
C [auth AC],
N [auth Ac]
IPR048260Cytochrome b/b6, C-terminal domain, eukaryotic/bacterialDomain
C [auth AC],
N [auth Ac]
IPR016174Di-haem cytochrome, transmembraneHomologous Superfamily
C [auth AC],
N [auth Ac]
IPR005798Cytochrome b/b6, C-terminalDomain
C [auth AC],
N [auth Ac]
IPR048259Cytochrome b/b6, N-terminal domain, eukaryotic/bacterialDomain
C [auth AC],
N [auth Ac]
IPR005797Cytochrome b/b6, N-terminal domainDomain
C [auth AC],
N [auth Ac]
IPR027387Cytochrome b/b6-like domain superfamilyHomologous Superfamily
C [auth AC],
N [auth Ac]
IPR030689Cytochrome bFamily
D [auth AD],
O [auth Ad]
IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
D [auth AD],
O [auth Ad]
IPR002326Cytochrome c1Family
D [auth AD],
O [auth Ad]
IPR009056Cytochrome c-like domainDomain
D [auth AD],
O [auth Ad]
IPR021157Cytochrome c1, transmembrane anchor, C-terminalHomologous Superfamily
E [auth AE],
I [auth AI],
P [auth Ae]
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
E [auth AE],
I [auth AI],
P [auth Ae]
IPR014349Rieske iron-sulphur proteinFamily
E [auth AE],
I [auth AI],
P [auth Ae]
IPR011070Globular protein, non-globular alpha/beta subunitHomologous Superfamily
E [auth AE],
I [auth AI],
P [auth Ae]
IPR004192Cytochrome b-c1 complex subunit Rieske, transmembrane domainDomain
E [auth AE],
I [auth AI],
P [auth Ae]
IPR015248Ubiquinol-cytochrome c reductase iron-sulphur subunit, N-terminalDomain
E [auth AE],
I [auth AI],
P [auth Ae]
IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
E [auth AE],
I [auth AI],
P [auth Ae]
IPR005805Rieske iron-sulphur protein, C-terminalDomain
E [auth AE],
I [auth AI],
P [auth Ae]
IPR037008Cytochrome bc1 complex subunit Rieske, transmembrane domain superfamilyHomologous Superfamily
E [auth AE],
I [auth AI],
P [auth Ae]
IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitDomain
F [auth AF],
Q [auth Af]
IPR003197Cytochrome b-c1 complex subunit 7Family
F [auth AF],
Q [auth Af]
IPR036544Cytochrome b-c1 complex subunit 7 superfamilyHomologous Superfamily
G [auth AG],
R [auth Ag]
IPR004205Cytochrome b-c1 complex subunit 8Family
G [auth AG],
R [auth Ag]
IPR036642Cytochrome b-c1 complex subunit 8 superfamilyHomologous Superfamily
H [auth AH],
S [auth Ah]
IPR003422Cytochrome b-c1 complex, subunit 6Family
H [auth AH],
S [auth Ah]
IPR023184Ubiquinol-cytochrome C reductase hinge domainDomain
H [auth AH],
S [auth Ah]
IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilyHomologous Superfamily
J [auth AJ],
T [auth Aj]
IPR008027Cytochrome b-c1 complex subunit 9Family
J [auth AJ],
T [auth Aj]
IPR036656Cytochrome b-c1 complex subunit 9 superfamilyHomologous Superfamily