8IC4

Respiratory complex Membrane domain of CI, focus-refined of type I, PERK -/- mouse under cold temperature


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
B [auth J]SCOP2B SuperfamilyNADH-quinone oxidoreductase, subunit 11-like 8067568 3002200 SCOP2B (2022-06-29)
C [auth K]SCOP2B SuperfamilyNADH-quinone oxidoreductase, subunit 11-like 8067562 3002200 SCOP2B (2022-06-29)
D [auth L]SCOP2B SuperfamilyAntiporter subunits half-channel-like 8093349 3002280 SCOP2B (2022-06-29)
D [auth L]SCOP2B SuperfamilyAntiporter subunits half-channel-like 8067566 3002280 SCOP2B (2022-06-29)
E [auth M]SCOP2B SuperfamilyAntiporter subunits half-channel-like 8067564 3002280 SCOP2B (2022-06-29)
E [auth M]SCOP2B SuperfamilyAntiporter subunits half-channel-like 8093346 3002280 SCOP2B (2022-06-29)
F [auth N]SCOP2B SuperfamilyAntiporter subunits half-channel-like 8093350 3002280 SCOP2B (2022-06-29)
F [auth N]SCOP2B SuperfamilyAntiporter subunits half-channel-like 8067557 3002280 SCOP2B (2022-06-29)
H [auth U]SCOP2B SuperfamilyACP-like 8074644 3001805 SCOP2B (2022-06-29)
O [auth g]SCOP2B SuperfamilyESSS subunit of respiratory complex I 8104651 3002418 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth D]PF06374NADH-ubiquinone oxidoreductase subunit b14.5b (NDUFC2) (NDUF_C2)NADH-ubiquinone oxidoreductase subunit b14.5b (NDUFC2)- Family
B [auth J]PF14813NADH dehydrogenase 1 beta subcomplex subunit 2 (NADH_B2)NADH dehydrogenase 1 beta subcomplex subunit 2- Family
B [auth J]PF00499NADH-ubiquinone/plastoquinone oxidoreductase chain 6 (Oxidored_q3)NADH-ubiquinone/plastoquinone oxidoreductase chain 6- Family
C [auth K]PF08122NADH-ubiquinone oxidoreductase B12 subunit family (NDUF_B12)NADH-ubiquinone oxidoreductase B12 subunit family- Family
C [auth K]PF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4L (Oxidored_q2)NADH-ubiquinone/plastoquinone oxidoreductase chain 4L- Family
D [auth L]PF00361Proton-conducting membrane transporter (Proton_antipo_M)Proton-conducting membrane transporter- Family
D [auth L]PF06455NADH dehydrogenase subunit 5 C-terminus (NADH5_C)NADH dehydrogenase subunit 5 C-terminus- Family
D [auth L]PF00662NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus (Proton_antipo_N)NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus- Family
E [auth M]PF00361Proton-conducting membrane transporter (Proton_antipo_M)Proton-conducting membrane transporter- Family
E [auth M]PF07225NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4) (NDUF_B4)NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4)- Family
E [auth M]PF01059NADH-ubiquinone oxidoreductase chain 4, amino terminus (Oxidored_q5_N)NADH-ubiquinone oxidoreductase chain 4, amino terminus- Family
F [auth N]PF00361Proton-conducting membrane transporter (Proton_antipo_M)Proton-conducting membrane transporter- Family
F [auth N]PF05347Complex 1 protein (LYR family) (Complex1_LYR)Complex 1 protein (LYR family)- Family
F [auth N]PF06444NADH dehydrogenase subunit 2 C-terminus (NADH_dehy_S2_C)NADH dehydrogenase subunit 2 C-terminus- Family
G [auth O]PF01712Deoxynucleoside kinase (dNK)Deoxynucleoside kinaseThis family consists of various deoxynucleoside kinases cytidine EC:2.7.1.74, guanosine EC:2.7.1.113, adenosine EC:2.7.1.76 and thymidine kinase EC:2.7.1.21 (which also phosphorylates deoxyuridine and deoxycytosine.) These enzymes catalyse the prod ...This family consists of various deoxynucleoside kinases cytidine EC:2.7.1.74, guanosine EC:2.7.1.113, adenosine EC:2.7.1.76 and thymidine kinase EC:2.7.1.21 (which also phosphorylates deoxyuridine and deoxycytosine.) These enzymes catalyse the production of deoxynucleotide 5'-monophosphate from a deoxynucleoside. Using ATP and yielding ADP in the process.
Domain
G [auth O]PF05676NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) (NDUF_B7)NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7)- Family
H [auth U]PF00550Phosphopantetheine attachment site (PP-binding)Phosphopantetheine attachment siteA 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes memb ...A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Swiss:P19828 has the attachment serine replaced by an alanine.
Domain
J [auth Y]PF02466Tim17/Tim22/Tim23/Pmp24 family (Tim17)Tim17/Tim22/Tim23/Pmp24 family- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth D]NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial
B [auth J]NADH-ubiquinone oxidoreductase chain 6
C [auth K]NADH-ubiquinone oxidoreductase chain 4L
D [auth L]NADH-ubiquinone oxidoreductase chain 5
E [auth M]NADH-ubiquinone oxidoreductase chain 4
F [auth N]NADH-ubiquinone oxidoreductase chain 2
G [auth O]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial
H [auth U]Acyl carrier protein, mitochondrial
I [auth X]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8
J [auth Y]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11- -
K [auth c]NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial-
L [auth d]NADH dehydrogenase [ubiquinone] 1 subunit C2-
M [auth e]NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-
N [auth f]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1-
O [auth g]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial-
P [auth h]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial-
Q [auth i]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6-
R [auth j]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial-
S [auth k]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-
T [auth l]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-
U [auth m]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4-
V [auth n]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-
W [auth o]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
X [auth p]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth D]IPR022885NAD(P)H-quinone oxidoreductase subunit D/HFamily
A [auth D]IPR001135NADH-quinone oxidoreductase, subunit DDomain
A [auth D]IPR014029NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved siteConserved Site
A [auth D]IPR029014[NiFe]-hydrogenase, large subunitHomologous Superfamily
B [auth J]IPR042106NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJHomologous Superfamily
B [auth J]IPR001457NADH:ubiquinone/plastoquinone oxidoreductase, chain 6Family
B [auth J]IPR050269Complex I Subunit 6Family
C [auth K]IPR001133NADH-ubiquinone oxidoreductase chain 4L/KFamily
C [auth K]IPR039428NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-likeFamily
D [auth L]IPR003945NADH-quinone oxidoreductase, chain 5-likeFamily
D [auth L]IPR010934NADH dehydrogenase subunit 5, C-terminalDomain
D [auth L]IPR001516NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminalDomain
D [auth L]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitDomain
D [auth L]IPR018393NADH-plastoquinone oxidoreductase, chain 5 subgroupFamily
E [auth M]IPR003918NADH:ubiquinone oxidoreductaseFamily
E [auth M]IPR010227NADH-quinone oxidoreductase, chain M/4Family
E [auth M]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitDomain
E [auth M]IPR000260NADH:ubiquinone oxidoreductase chain 4, N-terminalDomain
F [auth N]IPR010933NADH dehydrogenase subunit 2, C-terminalDomain
F [auth N]IPR003917NADH:ubiquinone oxidoreductase, chain 2Family
F [auth N]IPR050175Complex I Subunit 2Family
F [auth N]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitDomain
G [auth O]IPR050566Deoxyribonucleoside KinaseFamily
G [auth O]IPR031314Deoxynucleoside kinase domainDomain
G [auth O]IPR015828NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrialFamily
G [auth O]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
H [auth U]IPR006162Phosphopantetheine attachment sitePTM
H [auth U]IPR009081Phosphopantetheine binding ACP domainDomain
H [auth U]IPR036736ACP-like superfamilyHomologous Superfamily
H [auth U]IPR003231Acyl carrier proteinFamily
I [auth X]IPR010625CHCHDomain
I [auth X]IPR016680NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 8Family
J [auth Y]IPR039205NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11Family
K [auth c]IPR026192NADH-ubiquinone oxidoreductase 1 subunit C1Family
L [auth d]IPR009423NADH dehydrogenase [ubiquinone] 1 subunit C2, NDUC2Family
M [auth e]IPR019342NADH:ubiquinone oxidoreductase, iron-sulphur subunit 5Family
N [auth f]IPR012575NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1, NDUB1Family
O [auth g]IPR019329NADH:ubiquinone oxidoreductase, ESSS subunitFamily
P [auth h]IPR019173NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunitFamily
Q [auth i]IPR019174NADH dehydrogenase 1, beta subcomplex, subunit 6Family
R [auth j]IPR026627NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, animal typeFamily
S [auth k]IPR012576NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3Family
T [auth l]IPR008699NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8Family
T [auth l]IPR016551NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, metazoaFamily
U [auth m]IPR009866NADH:ubiquinone oxidoreductase, subunit NDUFB4Family
V [auth n]IPR033034NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9Family
V [auth n]IPR008011Complex 1 LYR protein domainDomain
V [auth n]IPR045292NDUFB9, LYR domainDomain
W [auth o]IPR008698NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, NDUB7Family
X [auth p]IPR019377NADH-ubiquinone oxidoreductase, subunit 10Family
X [auth p]IPR039993NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10Family