Respiratory complex Membrane domain of CI, focus-refined of type I, PERK -/- mouse under cold temperature
Shin, Y.-C., Liao, M.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial | A [auth D] | 463 | Mus musculus | Mutation(s): 0  EC: 7.1.1.2 Membrane Entity: Yes  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q91WD5 (Mus musculus) Explore Q91WD5  Go to UniProtKB:  Q91WD5 | |||||
IMPC:  MGI:2385112 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q91WD5 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
NADH-ubiquinone oxidoreductase chain 6 | B [auth J] | 172 | Mus musculus | Mutation(s): 0  EC: 7.1.1.2 Membrane Entity: Yes  | |
UniProt | |||||
Find proteins for P03925 (Mus musculus) Explore P03925  Go to UniProtKB:  P03925 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P03925 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
NADH-ubiquinone oxidoreductase chain 4L | C [auth K] | 98 | Mus musculus | Mutation(s): 0  EC: 7.1.1.2 Membrane Entity: Yes  | |
UniProt | |||||
Find proteins for P03903 (Mus musculus) Explore P03903  Go to UniProtKB:  P03903 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P03903 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 4 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
NADH-ubiquinone oxidoreductase chain 5 | D [auth L] | 607 | Mus musculus | Mutation(s): 0  EC: 7.1.1.2 Membrane Entity: Yes  | |
UniProt | |||||
Find proteins for P03921 (Mus musculus) Explore P03921  Go to UniProtKB:  P03921 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P03921 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 5 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
NADH-ubiquinone oxidoreductase chain 4 | E [auth M] | 459 | Mus musculus | Mutation(s): 0  EC: 7.1.1.2 Membrane Entity: Yes  | |
UniProt | |||||
Find proteins for P03911 (Mus musculus) Explore P03911  Go to UniProtKB:  P03911 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P03911 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 6 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
NADH-ubiquinone oxidoreductase chain 2 | F [auth N] | 345 | Mus musculus | Mutation(s): 0  EC: 7.1.1.2 Membrane Entity: Yes  | |
UniProt | |||||
Find proteins for P03893 (Mus musculus) Explore P03893  Go to UniProtKB:  P03893 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P03893 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 7 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial | G [auth O] | 355 | Mus musculus | Mutation(s): 0  Membrane Entity: Yes  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q99LC3 (Mus musculus) Explore Q99LC3  Go to UniProtKB:  Q99LC3 | |||||
IMPC:  MGI:1914523 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q99LC3 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 8 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Acyl carrier protein, mitochondrial | H [auth U] | 156 | Mus musculus | Mutation(s): 0  Membrane Entity: Yes  | |
UniProt | |||||
Find proteins for Q9CR21 (Mus musculus) Explore Q9CR21  Go to UniProtKB:  Q9CR21 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9CR21 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 9 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 | I [auth X] | 172 | Mus musculus | Mutation(s): 0  Membrane Entity: Yes  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9DCJ5 (Mus musculus) Explore Q9DCJ5  Go to UniProtKB:  Q9DCJ5 | |||||
IMPC:  MGI:1915625 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9DCJ5 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 10 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 | J [auth Y] | 143 | Mus musculus | Mutation(s): 0  Membrane Entity: Yes  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for G5E814 (Mus musculus) Explore G5E814  Go to UniProtKB:  G5E814 | |||||
IMPC:  MGI:1917125 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | G5E814 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 11 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial | K [auth c] | 76 | Mus musculus | Mutation(s): 0  Membrane Entity: Yes  | |
UniProt | |||||
Find proteins for Q9CQY9 (Mus musculus) Explore Q9CQY9  Go to UniProtKB:  Q9CQY9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9CQY9 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 12 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
NADH dehydrogenase [ubiquinone] 1 subunit C2 | L [auth d] | 120 | Mus musculus | Mutation(s): 0  Membrane Entity: Yes  | |
UniProt | |||||
Find proteins for Q9CQ54 (Mus musculus) Explore Q9CQ54  Go to UniProtKB:  Q9CQ54 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9CQ54 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 13 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 | M [auth e] | 106 | Mus musculus | Mutation(s): 0  Membrane Entity: Yes  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q99LY9 (Mus musculus) Explore Q99LY9  Go to UniProtKB:  Q99LY9 | |||||
IMPC:  MGI:1890889 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q99LY9 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 14 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1 | N [auth f] | 57 | Mus musculus | Mutation(s): 0  Membrane Entity: Yes  | |
UniProt | |||||
Find proteins for P0DN34 (Mus musculus) Explore P0DN34  Go to UniProtKB:  P0DN34 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0DN34 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 15 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial | O [auth g] | 151 | Mus musculus | Mutation(s): 0  Membrane Entity: Yes  | |
UniProt | |||||
Find proteins for O09111 (Mus musculus) Explore O09111  Go to UniProtKB:  O09111 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O09111 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 16 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial | P [auth h] | 189 | Mus musculus | Mutation(s): 0  Membrane Entity: Yes  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9CQH3 (Mus musculus) Explore Q9CQH3  Go to UniProtKB:  Q9CQH3 | |||||
IMPC:  MGI:1913296 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9CQH3 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 17 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 | Q [auth i] | 128 | Mus musculus | Mutation(s): 0  Membrane Entity: Yes  | |
UniProt | |||||
Find proteins for Q3UIU2 (Mus musculus) Explore Q3UIU2  Go to UniProtKB:  Q3UIU2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q3UIU2 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 18 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial | R [auth j] | 105 | Mus musculus | Mutation(s): 0  Membrane Entity: Yes  | |
UniProt | |||||
Find proteins for Q9CPU2 (Mus musculus) Explore Q9CPU2  Go to UniProtKB:  Q9CPU2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9CPU2 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 19 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 | S [auth k] | 104 | Mus musculus | Mutation(s): 0  Membrane Entity: Yes  | |
UniProt | |||||
Find proteins for Q9CQZ6 (Mus musculus) Explore Q9CQZ6  Go to UniProtKB:  Q9CQZ6 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9CQZ6 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 20 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial | T [auth l] | 186 | Mus musculus | Mutation(s): 0  Membrane Entity: Yes  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9D6J5 (Mus musculus) Explore Q9D6J5  Go to UniProtKB:  Q9D6J5 | |||||
IMPC:  MGI:1914514 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9D6J5 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 21 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 | U [auth m] | 129 | Mus musculus | Mutation(s): 0  Membrane Entity: Yes  | |
UniProt | |||||
Find proteins for Q9CQC7 (Mus musculus) Explore Q9CQC7  Go to UniProtKB:  Q9CQC7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9CQC7 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 22 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 | V [auth n] | 179 | Mus musculus | Mutation(s): 0  Membrane Entity: Yes  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9CQJ8 (Mus musculus) Explore Q9CQJ8  Go to UniProtKB:  Q9CQJ8 | |||||
IMPC:  MGI:1913468 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9CQJ8 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 23 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 | W [auth o] | 137 | Mus musculus | Mutation(s): 0  Membrane Entity: Yes  | |
UniProt | |||||
Find proteins for Q9CR61 (Mus musculus) Explore Q9CR61  Go to UniProtKB:  Q9CR61 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9CR61 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 24 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 | X [auth p] | 176 | Mus musculus | Mutation(s): 0  Membrane Entity: Yes  | |
UniProt | |||||
Find proteins for Q9DCS9 (Mus musculus) Explore Q9DCS9  Go to UniProtKB:  Q9DCS9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9DCS9 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 5 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
CDL (Subject of Investigation/LOI) Query on CDL | CA [auth L], HA [auth M], JA [auth Y], KA [auth d], LA [auth h] | CARDIOLIPIN C81 H156 O17 P2 XVTUQDWPJJBEHJ-KZCWQMDCSA-L | |||
3PE (Subject of Investigation/LOI) Query on 3PE | AA [auth L] BA [auth L] EA [auth L] FA [auth M] GA [auth M] | 1,2-Distearoyl-sn-glycerophosphoethanolamine C41 H82 N O8 P LVNGJLRDBYCPGB-LDLOPFEMSA-N | |||
EHZ (Subject of Investigation/LOI) Query on EHZ | OA [auth n] | ~{S}-[2-[3-[[(2~{R})-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] (3~{S})-3-oxidanyltetradecanethioate C25 H49 N2 O9 P S JYSKQPQRUCZFIQ-REWPJTCUSA-N | |||
ADP (Subject of Investigation/LOI) Query on ADP | IA [auth O] | ADENOSINE-5'-DIPHOSPHATE C10 H15 N5 O10 P2 XTWYTFMLZFPYCI-KQYNXXCUSA-N | |||
ZN (Subject of Investigation/LOI) Query on ZN | DA [auth L] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK) | United States | RO1 DK081418 |
National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK) | United States | RO1 DK089883 |