2JPA
Structure of the Wilms Tumor Suppressor Protein Zinc Finger Domain Bound to DNA
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | filter-edit NOESY | 0.6 mM [U-100% 13C; U-100% 15N] wt1-14mer | 90% H2O/10% D2O | 20 | 6.7 | ambient | 310 | |
2 | IPAP | 0.6 mM [U-100% 13C; U-100% 15N] wt1-14mer | 90% H2O/10% D2O | 20 | 6.7 | ambient | 310 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 800 |
NMR Refinement | ||
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Method | Details | Software |
molecular dynamics | Amber |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure solution | Amber | Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Koll | |
2 | refinement | Amber | Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Koll |