1T2A | pdb_00001t2a


GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 1T2A designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1T2A_GDP_D_1302Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1T2A_GDP_D_1302Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1T2A_GDP_D_1302Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
1T2A_GDP_D_1302 88% 48% 0.093 0.970.95 1.05 2 300100%1
1T2A_GDP_C_1202 84% 48% 0.091 0.9520.98 1.01 2 300100%1
1T2A_GDP_A_1002 77% 48% 0.104 0.9440.99 1.01 2 300100%1
1T2A_GDP_B_1102 64% 49% 0.12 0.9190.94 1.04 2 300100%1
5IN5_GDP_A_1002 99% 44% 0.053 0.9860.89 1.27 1 500100%1
5IN4_GDP_D_403 93% 50% 0.068 0.9630.83 1.11 - 200100%1
1TVK_GDP_B_1500 100% 23% 0.012 0.9992.28 0.95 3 280100%1
8QEG_GDP_A_401 100% 51% 0.031 0.9931.02 0.87 3 100100%1
8QEH_GDP_A_405 100% 55% 0.03 0.9930.89 0.85 1 100100%1
9BAJ_GDP_A_203 100% 41% 0.032 0.9941.22 1.1 2 210100%1
1RRG_GDP_A_183 100% 17% 0.036 0.9972.05 1.56 7 300100%1