AGS: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER

AGS is a Ligand Of Interest in 1XPO designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1XPO_AGS_E_5600Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1XPO_AGS_E_5600Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1XPO_AGS_E_5600Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
1XPO_AGS_E_5600 32% 13% 0.131 0.8022.41 1.53 7 4130100%1
1XPO_AGS_B_2600 22% 15% 0.145 0.7612.28 1.49 7 420100%1
1XPO_AGS_A_1600 18% 15% 0.157 0.742.33 1.48 7 410100%1
1XPO_AGS_D_4600 17% 15% 0.213 0.7882.33 1.48 6 440100%1
1XPO_AGS_F_6600 12% 15% 0.227 0.7592.28 1.48 7 430100%1
1XPO_AGS_C_3600 11% 16% 0.199 0.7112.23 1.49 7 510100%1
1XPU_AGS_E_5600 38% 17% 0.117 0.8182 1.61 6 7100100%1
1XPR_AGS_B_2600 12% 14% 0.357 0.8852.32 1.58 5 790100%1
6QV1_AGS_B_600 100% 67% 0.042 0.9950.58 0.7 - 100100%1
9EMY_AGS_A_601 100% 54% 0.043 0.9890.81 0.96 - 260100%0.87
3ZEU_AGS_E_1341 99% 20% 0.047 0.9751.9 1.51 6 300100%0.73
9EPN_AGS_A_501 99% 50% 0.054 0.9810.85 1.09 1 210100%1
8ROK_AGS_A_2001 98% 4% 0.057 0.9794.45 1.4 9 330100%1