UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 2JCK designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2JCK_UDP_A_3361 | 90% | 9% | 0.088 | 0.969 | 2.79 | 1.77 | 9 | 8 | 0 | 0 | 100% | 1 |
| 1GX4_UDP_B_401 | 100% | 27% | 0.047 | 0.992 | 1.85 | 1.09 | 3 | 4 | 0 | 0 | 100% | 1 |
| 2WGZ_UDP_A_1401 | 96% | 37% | 0.075 | 0.986 | 0.94 | 1.5 | 1 | 5 | 0 | 0 | 100% | 1 |
| 1GWW_UDP_B_1369 | 92% | 41% | 0.077 | 0.967 | 1.26 | 1.04 | 3 | 2 | 0 | 0 | 100% | 1 |
| 2VS3_UDP_A_401 | 91% | 36% | 0.09 | 0.978 | 0.95 | 1.54 | - | 5 | 0 | 0 | 100% | 1 |
| 1GX0_UDP_A_1369 | 90% | 22% | 0.084 | 0.968 | 2.06 | 1.18 | 4 | 4 | 0 | 0 | 100% | 1 |
| 8X3Q_UDP_C_401 | 100% | 3% | 0.015 | 0.998 | 3.32 | 2.69 | 13 | 13 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.31 | 2.68 | 13 | 13 | 2 | 0 | 100% | 1 |
| 8VH8_UDP_C_704 | 100% | 62% | 0.032 | 0.995 | 0.55 | 0.9 | - | 1 | 0 | 0 | 100% | 1 |
| 4GYW_UDP_C_1101 | 100% | 37% | 0.037 | 0.988 | 1.03 | 1.45 | 2 | 4 | 0 | 0 | 100% | 1 |
| 2IV7_UDP_A_1372 | 100% | 40% | 0.035 | 0.984 | 0.85 | 1.49 | - | 4 | 0 | 0 | 100% | 1 |
