ADP: ADENOSINE-5'-DIPHOSPHATE
ADP is a Ligand Of Interest in 2ONM designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2ONM_ADP_E_505 | 56% | 21% | 0.148 | 0.919 | 1.53 | 1.78 | 4 | 6 | 2 | 0 | 100% | 1 |
2ONM_ADP_I_509 | 50% | 13% | 0.162 | 0.911 | 1.76 | 2.19 | 5 | 5 | 2 | 0 | 100% | 1 |
2ONM_ADP_K_511 | 43% | 21% | 0.177 | 0.901 | 1.67 | 1.62 | 5 | 5 | 1 | 0 | 100% | 1 |
2ONM_ADP_L_512 | 36% | 23% | 0.212 | 0.904 | 1.68 | 1.49 | 4 | 6 | 0 | 0 | 100% | 1 |
2ONM_ADP_A_501 | 29% | 14% | 0.205 | 0.863 | 1.9 | 1.97 | 5 | 6 | 2 | 0 | 100% | 0.5 |
2ONM_ADP_J_510 | 28% | 25% | 0.185 | 0.835 | 1.69 | 1.35 | 4 | 3 | 1 | 0 | 100% | 1 |
2ONM_ADP_D_504 | 7% | 18% | 0.294 | 0.756 | 1.85 | 1.68 | 5 | 4 | 0 | 0 | 100% | 0.5 |
4FR8_ADP_H_1001 | 85% | 41% | 0.097 | 0.963 | 0.94 | 1.34 | 1 | 3 | 1 | 0 | 100% | 1 |
3N83_ADP_C_503 | 54% | 45% | 0.142 | 0.907 | 0.76 | 1.35 | - | 2 | 0 | 0 | 100% | 0.8519 |
3KB1_ADP_A_301 | 100% | 22% | 0.021 | 0.996 | 2.06 | 1.21 | 6 | 4 | 1 | 0 | 100% | 1 |
5GZA_ADP_A_401 | 100% | 2% | 0.019 | 0.997 | 3.36 | 3.39 | 13 | 11 | 1 | 0 | 100% | 1 |
5KHW_ADP_A_1201 | 100% | 41% | 0.023 | 0.995 | 1.1 | 1.2 | 1 | 2 | 0 | 0 | 100% | 1 |
8VZA_ADP_A_603 | 100% | 37% | 0.024 | 0.995 | 0.96 | 1.51 | 1 | 5 | 0 | 0 | 100% | 1 |
1PHP_ADP_A_396 | 100% | 24% | 0.026 | 0.995 | 1.29 | 1.8 | 3 | 11 | 1 | 0 | 100% | 1 |