RP5: 5-O-phosphono-beta-D-ribofuranose
RP5 is a Ligand Of Interest in 2R5N designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2R5N_RP5_B_681 | 23% | 40% | 0.294 | 0.921 | 1.41 | 0.96 | 1 | 1 | 0 | 0 | 100% | 0.5 |
2R5N_RP5_B_671 | 18% | 31% | 0.275 | 0.861 | 1.52 | 1.24 | 3 | 3 | 0 | 0 | 100% | 0.25 |
2NX1_RP5_A_1269 | 90% | 10% | 0.079 | 0.962 | 2.17 | 2.21 | 3 | 7 | 0 | 0 | 100% | 1 |
3M7I_RP5_A_801 | 84% | 28% | 0.101 | 0.963 | 1.28 | 1.61 | 2 | 5 | 1 | 0 | 100% | 1 |
7XEY_RP5_A_702 | 83% | 53% | 0.121 | 0.992 | 0.71 | 1.08 | - | 2 | 0 | 0 | 93% | 0.9286 |
1QVJ_RP5_A_554 | 70% | 6% | 0.131 | 0.948 | 2.97 | 2.16 | 6 | 7 | 0 | 1 | 100% | 1 |
3UPT_RP5_A_693 | 59% | 40% | 0.148 | 0.929 | 0.77 | 1.55 | - | 4 | 0 | 0 | 100% | 0.75 |