GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 2XKB designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2XKB_GDP_A_900 | 74% | 37% | 0.143 | 0.973 | 1.03 | 1.42 | 1 | 4 | 2 | 0 | 100% | 1 |
| 2XKB_GDP_G_900 | 73% | 43% | 0.139 | 0.968 | 0.97 | 1.23 | 2 | 5 | 0 | 0 | 100% | 1 |
| 2XKB_GDP_E_900 | 73% | 42% | 0.131 | 0.957 | 1.09 | 1.14 | 2 | 5 | 0 | 0 | 100% | 1 |
| 2XKB_GDP_I_900 | 72% | 38% | 0.144 | 0.967 | 1.02 | 1.4 | - | 4 | 1 | 0 | 100% | 1 |
| 2XKB_GDP_B_900 | 70% | 36% | 0.141 | 0.958 | 1.12 | 1.38 | 2 | 7 | 1 | 0 | 100% | 1 |
| 2XKB_GDP_C_900 | 62% | 36% | 0.16 | 0.953 | 1.04 | 1.48 | 1 | 6 | 0 | 0 | 100% | 1 |
| 2XKB_GDP_K_900 | 54% | 46% | 0.176 | 0.941 | 0.97 | 1.12 | 1 | 3 | 0 | 0 | 100% | 1 |
| 2XKB_GDP_J_900 | 41% | 44% | 0.188 | 0.904 | 0.93 | 1.22 | 1 | 4 | 0 | 0 | 100% | 1 |
| 2XKB_GDP_D_900 | 25% | 43% | 0.263 | 0.898 | 0.9 | 1.28 | - | 5 | 3 | 0 | 100% | 1 |
| 2XKB_GDP_F_900 | 24% | 48% | 0.266 | 0.899 | 0.89 | 1.1 | - | 3 | 0 | 0 | 100% | 1 |
| 2XKB_GDP_L_900 | 21% | 35% | 0.235 | 0.844 | 1.01 | 1.53 | 2 | 8 | 1 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 8QEG_GDP_A_401 | 100% | 51% | 0.031 | 0.993 | 1.02 | 0.87 | 3 | 1 | 0 | 0 | 100% | 1 |
| 8QEH_GDP_A_405 | 100% | 55% | 0.03 | 0.993 | 0.89 | 0.85 | 1 | 1 | 0 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 2CXX_GDP_B_2401 | 100% | 29% | 0.031 | 0.989 | 1.26 | 1.57 | 1 | 3 | 0 | 0 | 100% | 1 |
