NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
NDP is a Ligand Of Interest in 2YAU designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2YAU_NDP_B_550 | 30% | 25% | 0.25 | 0.917 | 1.81 | 1.25 | 10 | 5 | 2 | 0 | 100% | 1 |
2YAU_NDP_A_550 | 25% | 26% | 0.269 | 0.908 | 1.75 | 1.28 | 10 | 4 | 0 | 0 | 100% | 1 |
2X50_NDP_B_1492 | 44% | 30% | 0.239 | 0.968 | 1.57 | 1.21 | 9 | 4 | 0 | 0 | 100% | 1 |
4APN_NDP_B_1490 | 38% | 7% | 0.248 | 0.954 | 2.34 | 2.47 | 10 | 7 | 0 | 0 | 100% | 1 |
2W0H_NDP_A_1488 | 34% | 24% | 0.254 | 0.938 | 2.07 | 1.05 | 11 | 4 | 3 | 4 | 100% | 1 |
4ADW_NDP_A_1490 | 12% | 19% | 0.341 | 0.869 | 1.7 | 1.76 | 9 | 6 | 2 | 0 | 100% | 0.75 |
1US0_NDP_A_318 | 100% | 45% | 0.027 | 0.998 | 1.21 | 0.91 | 3 | - | 4 | 0 | 100% | 1 |
2I16_NDP_A_319 | 100% | 46% | 0.028 | 0.998 | 1.2 | 0.9 | 3 | 1 | 0 | 0 | 100% | 1 |
2I17_NDP_A_319 | 100% | 46% | 0.029 | 0.998 | 1.22 | 0.89 | 3 | - | 0 | 0 | 100% | 1 |
2PF8_NDP_A_318 | 100% | 46% | 0.031 | 0.998 | 1.17 | 0.93 | 3 | - | 4 | 0 | 100% | 1 |
2PFH_NDP_A_318 | 100% | 26% | 0.03 | 0.998 | 1.79 | 1.2 | 8 | 7 | 4 | 0 | 100% | 1 |