NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE
NAD is a Ligand Of Interest in 2ONM designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2ONM_NAD_F_506 | 48% | 13% | 0.172 | 0.915 | 2.2 | 1.77 | 9 | 9 | 2 | 0 | 100% | 1 |
2ONM_NAD_H_508 | 46% | 12% | 0.16 | 0.894 | 2.36 | 1.69 | 10 | 10 | 1 | 0 | 100% | 1 |
2ONM_NAD_G_507 | 39% | 13% | 0.193 | 0.899 | 2.45 | 1.54 | 10 | 10 | 3 | 0 | 100% | 1 |
2ONM_NAD_C_503 | 34% | 11% | 0.196 | 0.88 | 2.21 | 1.96 | 8 | 15 | 1 | 0 | 100% | 1 |
2ONM_NAD_B_502 | 27% | 12% | 0.227 | 0.875 | 2.16 | 1.9 | 8 | 11 | 5 | 0 | 100% | 1 |
2ONP_NAD_C_503 | 90% | 14% | 0.086 | 0.968 | 2.07 | 1.76 | 10 | 12 | 0 | 0 | 100% | 1 |
1O01_NAD_F_5506 | 87% | 17% | 0.094 | 0.967 | 2.15 | 1.46 | 9 | 7 | 0 | 0 | 100% | 1 |
8DR9_NAD_B_603 | 84% | 40% | 0.096 | 0.959 | 0.9 | 1.43 | 1 | 8 | 5 | 0 | 100% | 1 |
1O04_NAD_C_6503 | 73% | 24% | 0.109 | 0.935 | 1.55 | 1.54 | 3 | 8 | 1 | 0 | 100% | 1 |
1CW3_NAD_G_7502 | 71% | 28% | 0.128 | 0.95 | 1.44 | 1.43 | 5 | 8 | 4 | 0 | 100% | 1 |
3CMC_NAD_R_408 | 100% | 20% | 0.016 | 0.998 | 1.63 | 1.74 | 4 | 9 | 0 | 0 | 100% | 1 |
3EC7_NAD_A_400 | 100% | 18% | 0.025 | 0.995 | 1.8 | 1.74 | 5 | 8 | 1 | 0 | 100% | 1 |
4URF_NAD_A_1249 | 100% | 44% | 0.034 | 0.995 | 0.96 | 1.2 | 2 | 4 | 0 | 0 | 100% | 1 |
2C5A_NAD_B_1374 | 100% | 23% | 0.039 | 0.992 | 1.34 | 1.84 | 6 | 7 | 1 | 0 | 100% | 1 |
1HET_NAD_A_402 | 100% | 10% | 0.043 | 0.994 | 2.25 | 2.1 | 9 | 8 | 0 | 0 | 100% | 0.9068 |