PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 3B8W designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3B8W_PLP_B_1001 | 85% | 6% | 0.115 | 0.98 | 2.78 | 2.36 | 6 | 10 | 0 | 0 | 100% | 0.9375 |
3B8W_PLP_A_1001 | 77% | 6% | 0.14 | 0.979 | 2.11 | 2.85 | 5 | 11 | 9 | 0 | 100% | 0.9375 |
3B8W_PLP_C_1001 | 59% | 8% | 0.164 | 0.945 | 2.16 | 2.5 | 7 | 10 | 1 | 0 | 100% | 0.9375 |
3B8W_PLP_D_1001 | 48% | 4% | 0.191 | 0.933 | 2.68 | 3.17 | 7 | 11 | 2 | 0 | 100% | 0.9375 |
4WR3_PLP_A_1001 | 91% | 48% | 0.087 | 0.975 | 0.96 | 1.03 | 1 | - | 0 | 0 | 100% | 0.9375 |
2RJG_PLP_B_1001 | 88% | 6% | 0.104 | 0.981 | 2.78 | 2.36 | 6 | 10 | 0 | 0 | 100% | 0.9375 |
3B8V_PLP_A_1001 | 75% | 6% | 0.138 | 0.971 | 2.11 | 2.85 | 5 | 11 | 0 | 0 | 100% | 0.9375 |
3B8U_PLP_A_1001 | 72% | 6% | 0.161 | 0.985 | 2.11 | 2.85 | 5 | 11 | 0 | 0 | 100% | 0.9375 |
3B8T_PLP_C_1001 | 36% | 8% | 0.258 | 0.954 | 2.16 | 2.5 | 7 | 10 | 1 | 0 | 100% | 0.9375 |
2BIE_PLP_B_1361 | 100% | 28% | 0.039 | 0.989 | 1.48 | 1.39 | 4 | 3 | 1 | 0 | 100% | 0.9375 |
9J0V_PLP_A_301 | 100% | 36% | 0.037 | 0.987 | 0.82 | 1.68 | - | 5 | 0 | 0 | 100% | 0.9375 |
4NOG_PLP_A_501 | 100% | 38% | 0.042 | 0.992 | 1.24 | 1.18 | 3 | 1 | 0 | 0 | 100% | 1 |
4HT3_PLP_B_401 | 100% | 15% | 0.045 | 0.993 | 2.04 | 1.72 | 3 | 5 | 0 | 0 | 100% | 0.9375 |
3WQC_PLP_B_402 | 100% | 21% | 0.045 | 0.993 | 1.96 | 1.38 | 4 | 4 | 0 | 0 | 100% | 0.9375 |