3MBI | pdb_00003mbi


ADP: ADENOSINE-5'-DIPHOSPHATE

ADP is a Ligand Of Interest in 3MBI designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3MBI_ADP_B_288Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3MBI_ADP_B_288Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3MBI_ADP_B_288Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3MBI_ADP_B_288 98% 43% 0.056 0.9780.87 1.34 1 500100%0.956
3MBI_ADP_A_288 98% 42% 0.058 0.9780.85 1.39 - 300100%0.973
3MBI_ADP_D_288 93% 39% 0.064 0.9580.89 1.48 1 310100%1
3MBI_ADP_C_286 81% 40% 0.09 0.9420.9 1.43 1 600100%1
3LRT_ADP_B_300 68% 39% 0.1 0.910.92 1.47 1 300100%0.99
3NAG_ADP_B_300 65% 41% 0.107 0.9090.97 1.31 1 200100%1
3KB1_ADP_A_301 100% 22% 0.021 0.9962.06 1.21 6 410100%1
3TW6_ADP_B_2000 100% 44% 0.019 0.9970.83 1.34 - 430100%1
5GZA_ADP_A_401 100% 2% 0.019 0.9973.36 3.39 13 1110100%1
5KHW_ADP_A_1201 100% 41% 0.023 0.9951.1 1.2 1 200100%1
8VZA_ADP_A_603 100% 37% 0.024 0.9950.96 1.51 1 500100%1