TRD: TRIDECANE
TRD is a Ligand Of Interest in 3OMN designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3OMN_TRD_A_3 | 22% | 82% | 0.217 | 0.836 | 0.28 | 0.51 | - | - | 1 | 0 | 100% | 1 |
3OMN_TRD_A_1009 | 22% | 89% | 0.186 | 0.887 | 0.26 | 0.39 | - | - | 0 | 0 | 54% | 0.5385 |
3OMN_TRD_D_3 | 20% | 80% | 0.253 | 0.853 | 0.18 | 0.66 | - | - | 0 | 0 | 100% | 1 |
3OMN_TRD_D_14 | 16% | 90% | 0.222 | 0.872 | 0.25 | 0.37 | - | - | 0 | 0 | 54% | 0.5385 |
3OMN_TRD_B_4 | 15% | 88% | 0.196 | 0.827 | 0.25 | 0.41 | - | - | 0 | 0 | 62% | 0.6154 |
3OMN_TRD_A_553 | 14% | 84% | 0.263 | 0.813 | 0.23 | 0.52 | - | - | 1 | 0 | 100% | 1 |
3OMN_TRD_C_552 | 10% | 82% | 0.312 | 0.816 | 0.23 | 0.56 | - | - | 1 | 0 | 100% | 1 |
3OMN_TRD_A_552 | 4% | 88% | 0.285 | 0.769 | 0.33 | 0.33 | - | - | 0 | 0 | 46% | 0.4615 |
3OMN_TRD_A_1013 | 3% | 86% | 0.312 | 0.722 | 0.25 | 0.47 | - | - | 0 | 0 | 54% | 0.5385 |
6PW0_TRD_D_302 | 43% | 73% | 0.196 | 0.921 | 0.12 | 0.9 | - | - | 0 | 0 | 100% | 1 |
6PW1_TRD_D_301 | 42% | 76% | 0.141 | 0.913 | 0.12 | 0.81 | - | - | 0 | 0 | 69% | 0.6923 |
2GSM_TRD_A_5007 | 41% | 85% | 0.15 | 0.862 | 0.22 | 0.51 | - | - | 2 | 0 | 100% | 1 |
3FYE_TRD_D_1007 | 29% | 81% | 0.221 | 0.881 | 0.23 | 0.59 | - | - | 1 | 0 | 100% | 1 |
3OM3_TRD_C_3 | 28% | 82% | 0.226 | 0.878 | 0.27 | 0.53 | - | - | 1 | 0 | 100% | 1 |
4ZR1_TRD_A_410 | 49% | 75% | 0.18 | 0.926 | 0.12 | 0.84 | - | - | 1 | 0 | 100% | 1 |
6LPK_TRD_A_2422 | 41% | 98% | 0.14 | 0.853 | 0.14 | 0.14 | - | - | 0 | 0 | 100% | 1 |
6LPJ_TRD_A_2422 | 38% | 98% | 0.154 | 0.855 | 0.13 | 0.16 | - | - | 0 | 0 | 100% | 1 |