PGV: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE
PGV is a Ligand Of Interest in 3RLF designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3RLF_PGV_F_4001 | 17% | 46% | 0.227 | 0.805 | 1.08 | 1.02 | 3 | 3 | 2 | 0 | 100% | 1 |
| 3RLF_PGV_G_4006 | 10% | 81% | 0.194 | 0.83 | 0.27 | 0.54 | - | - | 1 | 0 | 27% | 0.2745 |
| 3RLF_PGV_G_4009 | 4% | 82% | 0.227 | 0.728 | 0.27 | 0.53 | - | - | 0 | 0 | 24% | 0.2353 |
| 3RLF_PGV_F_4002 | 3% | 82% | 0.25 | 0.718 | 0.28 | 0.52 | - | - | 0 | 0 | 27% | 0.2745 |
| 3PUZ_PGV_F_4001 | 48% | 46% | 0.144 | 0.885 | 1.08 | 1.01 | 3 | 3 | 1 | 0 | 100% | 1 |
| 4KI0_PGV_F_605 | 28% | 45% | 0.228 | 0.879 | 1.1 | 1.03 | 3 | 3 | 0 | 0 | 100% | 1 |
| 3PUX_PGV_F_4001 | 27% | 42% | 0.197 | 0.845 | 1.15 | 1.11 | 3 | 3 | 0 | 0 | 100% | 1 |
| 3PUV_PGV_F_4001 | 23% | 46% | 0.22 | 0.841 | 1.08 | 1.02 | 3 | 3 | 0 | 0 | 100% | 1 |
| 3PUW_PGV_F_4001 | 20% | 45% | 0.232 | 0.832 | 1.09 | 1.05 | 3 | 3 | 1 | 0 | 100% | 1 |
| 5B1A_PGV_P_303 | 98% | 35% | 0.064 | 0.985 | 1.06 | 1.51 | 3 | 13 | 4 | 0 | 100% | 1 |
| 5X1B_PGV_C_302 | 95% | 52% | 0.078 | 0.981 | 0.92 | 0.93 | 2 | 4 | 0 | 0 | 100% | 1 |
| 5B1B_PGV_C_302 | 94% | 56% | 0.078 | 0.979 | 0.81 | 0.87 | 1 | 1 | 3 | 0 | 100% | 1 |
| 7YPY_PGV_P_302 | 94% | 54% | 0.079 | 0.978 | 0.79 | 0.99 | 2 | 2 | 1 | 0 | 100% | 1 |
| 7COH_PGV_C_267 | 93% | 49% | 0.087 | 0.983 | 0.87 | 1.09 | 3 | 3 | 0 | 0 | 100% | 1 |
