Ligand validation:3S28

UDP: URIDINE-5'-DIPHOSPHATE

UDP is a Ligand Of Interest in 3S28 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
3S28_UDP_B_901	79%	29%	0.141	0.989	0.97	1.85	-	8	1	0	100%	0.98
3S28_UDP_A_901	79%	32%	0.145	0.993	0.99	1.71	1	7	3	0	100%	1
3S28_UDP_F_901	78%	32%	0.148	0.992	0.99	1.69	1	6	1	0	100%	1
3S28_UDP_D_901	77%	27%	0.147	0.989	1.02	1.88	-	8	4	0	100%	1
3S28_UDP_G_901	76%	35%	0.152	0.989	1.03	1.52	1	7	4	0	100%	1
3S28_UDP_E_901	72%	32%	0.165	0.991	0.99	1.71	1	7	1	0	100%	0.96
3S28_UDP_C_901	66%	36%	0.175	0.981	0.92	1.56	-	6	0	0	100%	0.96
3S28_UDP_H_901	66%	31%	0.176	0.981	0.95	1.75	-	5	4	0	100%	0.95
3S27_UDP_D_901	77%	29%	0.148	0.989	1.03	1.81	-	6	2	0	100%	1
3S29_UDP_A_901	74%	35%	0.162	0.993	0.95	1.59	-	6	1	0	100%	1
8X3Q_UDP_C_401	100%	3%	0.015	0.998	3.32	2.69	13	13	0	0	100%	1
8X3U_UDP_B_401	100%	3%	0.012	0.999	3.31	2.68	13	13	2	0	100%	1
8VH8_UDP_C_704	100%	62%	0.032	0.995	0.55	0.9	-	1	0	0	100%	1
4GYW_UDP_C_1101	100%	37%	0.037	0.988	1.03	1.45	2	4	0	0	100%	1
2IV7_UDP_A_1372	100%	40%	0.035	0.984	0.85	1.49	-	4	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.