UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 3T7M designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3T7M_UDP_B_264 | 93% | 38% | 0.082 | 0.975 | 0.94 | 1.47 | 1 | 5 | 0 | 0 | 100% | 1 |
3T7M_UDP_A_264 | 89% | 39% | 0.084 | 0.963 | 0.96 | 1.39 | 1 | 6 | 0 | 0 | 100% | 1 |
3U2V_UDP_B_270 | 99% | 33% | 0.049 | 0.989 | 1.12 | 1.52 | 2 | 6 | 0 | 0 | 100% | 1 |
3U2U_UDP_B_268 | 99% | 34% | 0.053 | 0.986 | 1.05 | 1.53 | - | 7 | 0 | 0 | 100% | 1 |
3U2W_UDP_A_264 | 97% | 43% | 0.062 | 0.977 | 0.73 | 1.44 | - | 4 | 2 | 0 | 100% | 1 |
3RMV_UDP_A_264 | 90% | 32% | 0.076 | 0.96 | 1.07 | 1.62 | 2 | 6 | 0 | 0 | 100% | 1 |
3T7N_UDP_B_264 | 86% | 37% | 0.086 | 0.955 | 0.83 | 1.63 | - | 6 | 1 | 0 | 100% | 1 |
8VH8_UDP_C_704 | 100% | 62% | 0.032 | 0.995 | 0.55 | 0.9 | - | 1 | 0 | 0 | 100% | 1 |
4PHR_UDP_A_301 | 100% | 42% | 0.042 | 0.989 | 0.84 | 1.41 | - | 4 | 0 | 0 | 100% | 1 |
2B69_UDP_A_900 | 100% | 42% | 0.046 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
1GX4_UDP_A_401 | 100% | 32% | 0.046 | 0.991 | 1.68 | 1.03 | 2 | 3 | 0 | 0 | 100% | 1 |
5GY7_UDP_B_401 | 99% | 44% | 0.047 | 0.987 | 0.98 | 1.18 | 1 | 5 | 0 | 0 | 100% | 1 |