3VD9
DMS: DIMETHYL SULFOXIDE
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
3VD9_DMS_B_8019 | 90% | 26% | 0.092 | 0.976 | 2.68 | 0.36 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_B_8001 | 86% | 26% | 0.114 | 0.984 | 2.56 | 0.5 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_A_8005 | 85% | 28% | 0.113 | 0.978 | 2.57 | 0.39 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_B_8002 | 84% | 26% | 0.112 | 0.973 | 2.54 | 0.49 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_C_8001 | 82% | 24% | 0.123 | 0.978 | 2.59 | 0.6 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_C_8011 | 81% | 29% | 0.123 | 0.976 | 2.56 | 0.34 | 1 | - | 1 | 0 | 100% | 1 |
3VD9_DMS_A_8001 | 81% | 37% | 0.138 | 0.99 | 1.93 | 0.58 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_C_8005 | 79% | 46% | 0.124 | 0.97 | 1.86 | 0.28 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_D_8011 | 78% | 25% | 0.133 | 0.976 | 2.63 | 0.49 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_C_8003 | 78% | 41% | 0.138 | 0.981 | 1.94 | 0.41 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_C_8002 | 78% | 24% | 0.124 | 0.966 | 2.6 | 0.59 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_D_8005 | 77% | 30% | 0.137 | 0.977 | 2.57 | 0.29 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_B_8008 | 75% | 24% | 0.133 | 0.968 | 2.65 | 0.55 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_D_8008 | 74% | 38% | 0.14 | 0.97 | 2.04 | 0.43 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_B_8011 | 74% | 41% | 0.143 | 0.973 | 1.95 | 0.4 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_A_8002 | 73% | 26% | 0.149 | 0.977 | 2.58 | 0.5 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_B_8009 | 73% | 23% | 0.14 | 0.967 | 2.69 | 0.55 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_B_8010 | 72% | 28% | 0.163 | 0.988 | 2.57 | 0.39 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_D_8003 | 71% | 41% | 0.147 | 0.968 | 1.98 | 0.37 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_C_8017 | 70% | 25% | 0.145 | 0.963 | 2.61 | 0.52 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_A_8003 | 70% | 38% | 0.138 | 0.955 | 1.97 | 0.49 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_B_8018 | 69% | 24% | 0.14 | 0.954 | 2.64 | 0.54 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_B_8013 | 69% | 26% | 0.153 | 0.967 | 2.58 | 0.47 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_C_8012 | 67% | 22% | 0.174 | 0.983 | 2.64 | 0.64 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_B_8015 | 66% | 26% | 0.157 | 0.962 | 2.6 | 0.48 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_B_8003 | 63% | 39% | 0.176 | 0.974 | 1.89 | 0.52 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_A_8008 | 58% | 25% | 0.186 | 0.967 | 2.6 | 0.5 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_A_8009 | 57% | 26% | 0.177 | 0.954 | 2.62 | 0.43 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_C_8008 | 57% | 22% | 0.185 | 0.961 | 2.64 | 0.66 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_C_8016 | 56% | 22% | 0.175 | 0.946 | 2.7 | 0.59 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_D_8014 | 55% | 24% | 0.17 | 0.94 | 2.65 | 0.52 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_B_8005 | 50% | 28% | 0.195 | 0.948 | 2.59 | 0.36 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_C_8006 | 50% | 25% | 0.21 | 0.962 | 2.61 | 0.51 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_D_8012 | 50% | 24% | 0.169 | 0.919 | 2.66 | 0.54 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_C_8007 | 47% | 25% | 0.165 | 0.903 | 2.63 | 0.49 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_A_8004 | 45% | 25% | 0.2 | 0.933 | 2.61 | 0.52 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_B_8004 | 42% | 24% | 0.193 | 0.912 | 2.56 | 0.61 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_B_8006 | 42% | 22% | 0.194 | 0.912 | 2.65 | 0.68 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_D_8010 | 41% | 23% | 0.22 | 0.937 | 2.56 | 0.68 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_B_8014 | 41% | 21% | 0.177 | 0.891 | 2.64 | 0.7 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_A_8013 | 41% | 24% | 0.195 | 0.909 | 2.65 | 0.53 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_C_8015 | 38% | 23% | 0.211 | 0.916 | 2.64 | 0.58 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_D_8001 | 38% | 20% | 0.219 | 0.924 | 2.6 | 0.81 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_A_8007 | 38% | 22% | 0.205 | 0.909 | 2.66 | 0.63 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_D_8006 | 36% | 25% | 0.169 | 0.861 | 2.64 | 0.5 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_B_8017 | 36% | 23% | 0.205 | 0.898 | 2.66 | 0.55 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_D_8002 | 36% | 31% | 0.23 | 0.923 | 2.52 | 0.31 | 1 | - | 1 | 0 | 100% | 1 |
3VD9_DMS_C_8004 | 35% | 24% | 0.199 | 0.888 | 2.62 | 0.56 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_A_8010 | 35% | 24% | 0.21 | 0.899 | 2.64 | 0.54 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_C_8010 | 35% | 22% | 0.215 | 0.904 | 2.7 | 0.58 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_C_8009 | 34% | 24% | 0.239 | 0.922 | 2.6 | 0.56 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_B_8016 | 33% | 25% | 0.222 | 0.903 | 2.57 | 0.56 | 1 | - | 1 | 0 | 100% | 1 |
3VD9_DMS_D_8004 | 33% | 27% | 0.245 | 0.926 | 2.58 | 0.44 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_C_8013 | 33% | 23% | 0.242 | 0.922 | 2.61 | 0.64 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_C_8014 | 33% | 24% | 0.213 | 0.89 | 2.65 | 0.55 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_B_8020 | 32% | 28% | 0.239 | 0.914 | 2.64 | 0.32 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_D_8007 | 29% | 22% | 0.239 | 0.897 | 2.65 | 0.66 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_B_8007 | 26% | 24% | 0.203 | 0.845 | 2.65 | 0.5 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_A_8011 | 26% | 24% | 0.24 | 0.883 | 2.65 | 0.53 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_D_8009 | 25% | 24% | 0.238 | 0.871 | 2.69 | 0.47 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_B_8012 | 23% | 24% | 0.265 | 0.886 | 2.62 | 0.58 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_A_8006 | 22% | 22% | 0.271 | 0.889 | 2.64 | 0.65 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_D_8013 | 17% | 23% | 0.226 | 0.808 | 2.66 | 0.59 | 1 | - | 0 | 0 | 100% | 1 |
3VD9_DMS_A_8012 | 16% | 20% | 0.3 | 0.872 | 2.66 | 0.77 | 1 | - | 0 | 0 | 100% | 1 |
1JYN_DMS_C_8401 | 100% | 79% | 0.039 | 0.995 | 0.61 | 0.27 | - | - | 0 | 0 | 100% | 1 |
1JZ8_DMS_D_8401 | 100% | 57% | 0.038 | 0.993 | 1.24 | 0.43 | - | - | 0 | 0 | 100% | 1 |
1JYW_DMS_C_8401 | 100% | 75% | 0.042 | 0.994 | 0.78 | 0.23 | - | - | 0 | 0 | 100% | 1 |
1JZ7_DMS_B_8411 | 100% | 69% | 0.045 | 0.993 | 0.52 | 0.68 | - | - | 0 | 0 | 100% | 1 |
3DYP_DMS_C_8401 | 100% | 72% | 0.048 | 0.996 | 0.96 | 0.15 | - | - | 0 | 0 | 100% | 1 |
7P7D_DMS_A_906 | 100% | 86% | 0.042 | 0.993 | 0.36 | 0.37 | - | - | 0 | 0 | 100% | 1 |
7GBT_DMS_A_1002 | 100% | 86% | 0.044 | 0.993 | 0.51 | 0.22 | - | - | 0 | 0 | 100% | 1 |
7GEM_DMS_A_401 | 100% | 84% | 0.043 | 0.991 | 0.56 | 0.22 | - | - | 0 | 0 | 100% | 1 |