Ligand validation:3VDF

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 3VDF designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
3VDF_NAG_A_701	28%	18%	0.178	0.831	1.18	2.29	1	6	0	0	100%	0.9333
4OQO_NAG_A_702	64%	42%	0.118	0.916	0.65	1.58	-	3	0	0	100%	0.9333
7FDW_NAG_B_701	54%	43%	0.122	0.885	0.83	1.35	-	2	0	0	100%	0.9333
5CRY_NAG_B_704	50%	26%	0.151	0.9	0.71	2.23	-	4	0	0	100%	0.9333
5HBC_NAG_B_704	49%	26%	0.151	0.899	0.71	2.23	-	4	0	0	100%	0.9333
7EVQ_NAG_B_701	40%	74%	0.172	0.881	0.48	0.52	-	-	0	0	100%	0.9333
3H0C_NAG_A_794	100%	56%	0.021	0.995	0.61	1.08	-	1	0	0	100%	0.9333
5F9W_NAG_A_510	100%	88%	0.023	0.994	0.24	0.43	-	-	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.