UMP: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE
UMP is a Ligand Of Interest in 4EB4 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4EB4_UMP_B_401 | 98% | 29% | 0.068 | 0.987 | 1.11 | 1.71 | 2 | 5 | 3 | 0 | 100% | 1 |
| 4EB4_UMP_A_401 | 95% | 25% | 0.071 | 0.976 | 1.41 | 1.63 | 3 | 6 | 2 | 0 | 100% | 1 |
| 4EB4_UMP_D_401 | 88% | 27% | 0.078 | 0.954 | 1.09 | 1.81 | 2 | 7 | 2 | 0 | 100% | 1 |
| 4EB4_UMP_C_401 | 82% | 23% | 0.081 | 0.935 | 1.21 | 1.96 | 3 | 6 | 2 | 0 | 100% | 1 |
| 4E5O_UMP_A_501 | 97% | 33% | 0.066 | 0.98 | 0.96 | 1.69 | 1 | 7 | 0 | 0 | 100% | 1 |
| 6GKO_UMP_A_501 | 92% | 21% | 0.093 | 0.986 | 1.29 | 2 | 4 | 5 | 0 | 0 | 100% | 1 |
| 1RTS_UMP_B_408 | 88% | 71% | 0.106 | 0.981 | 0.35 | 0.77 | - | 1 | 1 | 0 | 100% | 1 |
| 6Y08_UMP_A_501 | 84% | 19% | 0.12 | 0.984 | 1.16 | 2.26 | 1 | 9 | 0 | 0 | 100% | 1 |
| 2TSR_UMP_C_508 | 58% | 67% | 0.164 | 0.942 | 0.47 | 0.8 | - | 1 | 1 | 0 | 100% | 1 |
| 3TPY_UMP_A_154 | 100% | 40% | 0.041 | 0.993 | 0.89 | 1.44 | 1 | 5 | 0 | 0 | 100% | 0.3 |
| 3TQ4_UMP_A_777 | 100% | 32% | 0.038 | 0.99 | 1.04 | 1.65 | 1 | 8 | 0 | 0 | 100% | 0.8 |
| 3TQ5_UMP_A_777 | 100% | 22% | 0.046 | 0.989 | 1.35 | 1.9 | 3 | 6 | 0 | 0 | 100% | 1 |
| 3TQ3_UMP_A_777 | 100% | 38% | 0.049 | 0.99 | 0.91 | 1.5 | 1 | 5 | 0 | 0 | 100% | 0.3 |
| 3TRN_UMP_A_777 | 99% | 30% | 0.047 | 0.987 | 1.2 | 1.58 | 2 | 6 | 0 | 0 | 100% | 1 |
