Ligand validation:4YK4

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 4YK4 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4YK4_NAG_A_302	12%	47%	0.275	0.804	0.79	1.23	-	1	2	0	100%	0.9333
4YK4_NAG_E_303	11%	77%	0.284	0.805	0.3	0.61	-	-	0	0	100%	0.9333
4YK4_NAG_A_301	7%	71%	0.334	0.792	0.36	0.73	-	-	0	1	100%	0.9333
4YK4_NAG_E_301	7%	41%	0.265	0.72	0.52	1.76	-	4	1	1	100%	0.9333
4YK4_NAG_E_302	5%	77%	0.381	0.786	0.29	0.62	-	-	6	0	100%	0.9333
4YK4_NAG_A_303	3%	77%	0.372	0.684	0.3	0.61	-	-	1	0	100%	0.9333
4YJZ_NAG_E_302	9%	77%	0.296	0.791	0.3	0.62	-	-	9	0	100%	0.9333
6Q0O_NAG_A_310	8%	87%	0.166	0.643	0.26	0.42	-	-	0	0	100%	0.9333
4HKX_NAG_E_301	4%	80%	0.28	0.661	0.29	0.54	-	-	1	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333
3PPS_NAG_B_760	100%	44%	0.028	0.993	0.57	1.57	-	3	0	0	100%	0.9333
5O59_NAG_A_601	100%	70%	0.024	0.993	0.3	0.85	-	-	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.