NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 5AFM designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5AFM_NAG_C_301 | 68% | 24% | 0.105 | 0.927 | 1.4 | 1.68 | 3 | 5 | 1 | 0 | 93% | 0.9333 |
5AFM_NAG_D_301 | 58% | 18% | 0.139 | 0.931 | 1.31 | 2.23 | 2 | 5 | 5 | 0 | 93% | 0.9333 |
5AFM_NAG_E_301 | 57% | 28% | 0.147 | 0.936 | 1.25 | 1.63 | 3 | 4 | 6 | 0 | 93% | 0.9333 |
5AFM_NAG_E_302 | 33% | 18% | 0.171 | 0.863 | 1.59 | 1.95 | 4 | 4 | 3 | 0 | 93% | 0.9333 |
5AFM_NAG_B_301 | 29% | 27% | 0.183 | 0.853 | 1.3 | 1.61 | 3 | 5 | 3 | 0 | 93% | 0.9333 |
5AFM_NAG_A_301 | 23% | 24% | 0.199 | 0.836 | 1.35 | 1.73 | 3 | 5 | 4 | 0 | 93% | 0.9333 |
5AFM_NAG_A_302 | 20% | 19% | 0.22 | 0.831 | 1.55 | 1.91 | 4 | 4 | 2 | 0 | 93% | 0.9333 |
5AFM_NAG_D_302 | 7% | 19% | 0.287 | 0.761 | 1.54 | 1.91 | 3 | 4 | 3 | 0 | 93% | 0.9333 |
5AFM_NAG_B_302 | 4% | 15% | 0.302 | 0.696 | 1.71 | 2.07 | 6 | 4 | 2 | 0 | 93% | 0.9333 |
5AFM_NAG_C_302 | 2% | 17% | 0.332 | 0.642 | 1.59 | 1.97 | 4 | 4 | 1 | 0 | 93% | 0.9333 |
4HQP_NAG_B_803 | 28% | 66% | 0.241 | 0.893 | 0.69 | 0.63 | - | - | 1 | 0 | 100% | 0.9333 |
3SQ6_NAG_H_901 | 13% | 53% | 0.264 | 0.805 | 0.95 | 0.86 | 1 | 1 | 2 | 0 | 100% | 0.9333 |
3SQ9_NAG_B_901 | 10% | 41% | 0.213 | 0.715 | 1.1 | 1.21 | 2 | 1 | 0 | 0 | 100% | 0.9333 |
1OC7_NAG_A_500 | 100% | 60% | 0.04 | 0.991 | 0.61 | 0.9 | - | 1 | 0 | 0 | 100% | 0.9333 |
1OC6_NAG_A_500 | 100% | 67% | 0.041 | 0.988 | 0.46 | 0.8 | - | 1 | 0 | 0 | 100% | 0.9333 |
1UWC_NAG_A_262 | 100% | 54% | 0.046 | 0.99 | 0.83 | 0.93 | - | - | 0 | 0 | 100% | 0.9333 |
6ZE6_NAG_B_703 | 100% | 52% | 0.044 | 0.984 | 0.78 | 1.07 | - | 2 | 0 | 0 | 100% | 0.8667 |
6ZE2_NAG_B_704 | 99% | 56% | 0.042 | 0.979 | 0.73 | 0.95 | - | 1 | 0 | 0 | 100% | 0.9333 |