5KMD
MC3: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE
MC3 is a Ligand Of Interest in 5KMD designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
5KMD_MC3_D_1303 | 22% | 53% | 0.144 | 0.903 | 0.96 | 0.86 | 1 | - | 0 | 0 | 22% | 0.2174 |
5KMD_MC3_A_1305 | 22% | 45% | 0.173 | 0.928 | 0.93 | 1.19 | - | - | 0 | 0 | 22% | 0.2174 |
5KMD_MC3_C_1303 | 20% | 50% | 0.188 | 0.934 | 0.99 | 0.93 | - | - | 0 | 0 | 22% | 0.2174 |
5KMD_MC3_A_1307 | 20% | 46% | 0.194 | 0.94 | 0.9 | 1.16 | - | - | 0 | 0 | 22% | 0.2174 |
5KMD_MC3_B_1303 | 17% | 49% | 0.217 | 0.94 | 1.13 | 0.86 | 1 | - | 4 | 0 | 22% | 0.2174 |
5KMD_MC3_A_1306 | 17% | 51% | 0.196 | 0.915 | 1.01 | 0.89 | 1 | - | 0 | 0 | 22% | 0.2174 |
5KMD_MC3_B_1302 | 17% | 20% | 0.238 | 0.915 | 1.92 | 1.48 | 3 | 2 | 1 | 0 | 46% | 0.4565 |
5KMD_MC3_A_1304 | 17% | 21% | 0.249 | 0.925 | 1.76 | 1.55 | 3 | 2 | 2 | 0 | 46% | 0.4565 |
5KMD_MC3_A_1303 | 16% | 20% | 0.28 | 0.954 | 1.82 | 1.58 | 5 | 3 | 3 | 0 | 46% | 0.4565 |
5KMD_MC3_D_1302 | 15% | 81% | 0.243 | 0.962 | 0.53 | 0.29 | - | - | 0 | 0 | 13% | 13.04 |
5KMD_MC3_C_1302 | 13% | 40% | 0.212 | 0.896 | 1.14 | 1.21 | 1 | 1 | 0 | 0 | 22% | 0.2174 |
5KMD_MC3_B_1301 | 10% | 73% | 0.283 | 0.943 | 0.47 | 0.58 | - | - | 1 | 0 | 13% | 13.04 |
5KMD_MC3_A_1301 | 8% | 85% | 0.305 | 0.93 | 0.37 | 0.37 | - | - | 0 | 0 | 13% | 13.04 |
5KMD_MC3_A_1302 | 6% | 76% | 0.361 | 0.954 | 0.61 | 0.34 | - | - | 2 | 0 | 13% | 13.04 |
5KLB_MC3_D_1305 | 50% | 19% | 0.199 | 0.965 | 1.67 | 1.81 | 4 | 6 | 1 | 0 | 91% | 0.913 |
5KMF_MC3_C_1305 | 28% | 58% | 0.136 | 0.929 | 0.9 | 0.7 | - | - | 0 | 0 | 22% | 0.2174 |
6JUH_MC3_B_1302 | 21% | 19% | 0.222 | 0.927 | 1.65 | 1.78 | 3 | 2 | 0 | 0 | 46% | 0.4565 |
5KMH_MC3_A_1306 | 19% | 37% | 0.212 | 0.947 | 1.08 | 1.39 | 1 | 2 | 0 | 0 | 22% | 0.2174 |
2XTV_MC3_A_501 | 52% | 42% | 0.13 | 0.935 | 1.18 | 1.09 | 3 | 4 | 1 | 0 | 74% | 0.7391 |
4C00_MC3_A_611 | 49% | 50% | 0.196 | 0.954 | 0.95 | 0.97 | 1 | 4 | 0 | 0 | 93% | 0.9348 |