5VDQ | pdb_00005vdq


9BG: 2',5'-GpAp

9BG is a Ligand Of Interest in 5VDQ designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5VDQ_9BG_B_602Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5VDQ_9BG_B_602Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5VDQ_9BG_B_602 23% 3% 0.179 0.7984.67 1.32 23 510100%1
5VDQ_9BG_A_602 22% 4% 0.248 0.8644.69 1.25 23 510100%1
6XB3_9BG_P_301 95% 2% 0.075 0.9774.78 1.83 20 750100%1
6XB4_9BG_B_201 93% 2% 0.074 0.9674.8 2.13 20 840100%1
6EA9_9BG_E_301 75% 3% 0.114 0.9484.08 1.92 20 930100%1
6XB5_9BG_A_301 67% 2% 0.158 0.9685.22 1.85 19 970100%1