Ligand validation:5XK9

DMA: DIMETHYLALLYL DIPHOSPHATE

DMA is a Ligand Of Interest in 5XK9 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5XK9_DMA_D_502	61%	37%	0.162	0.952	1.19	1.27	1	2	2	0	100%	1
5XK9_DMA_H_502	45%	36%	0.193	0.926	1.17	1.36	1	3	1	0	100%	1
5XK9_DMA_E_502	28%	35%	0.194	0.846	1.12	1.42	1	3	1	0	100%	0.7143
5XK9_DMA_B_502	22%	36%	0.251	0.865	1.16	1.36	1	3	2	0	100%	1
5XK9_DMA_F_502	18%	33%	0.223	0.813	1.15	1.47	1	3	2	0	100%	1
5XK9_DMA_A_502	10%	38%	0.248	0.755	1.06	1.38	1	3	0	0	100%	0.7143
5XK9_DMA_G_502	8%	36%	0.283	0.754	1.09	1.42	1	2	0	0	100%	0.7143
5XK9_DMA_C_502	7%	36%	0.252	0.704	1.1	1.42	1	2	0	0	100%	0.7143
5XK7_DMA_B_303	87%	39%	0.108	0.98	1.15	1.21	1	2	0	0	100%	1
7VQA_DMA_A_301	99%	58%	0.057	0.987	0.86	0.77	-	-	0	0	100%	1
5YNT_DMA_A_401	98%	50%	0.062	0.988	0.97	0.95	-	-	0	0	100%	1
3PDE_DMA_D_309	98%	50%	0.068	0.987	0.64	1.27	-	2	1	0	100%	1
4GP1_DMA_A_402	96%	35%	0.071	0.981	1.9	0.71	5	-	1	0	100%	1
3B06_DMA_C_701	95%	40%	0.076	0.982	0.68	1.64	-	4	1	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.