RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Structure Author = "Zhang, Y."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 1,346 Structures.

Refinements

Structure Determination Methodology

experimental (1,346)

Scientific Name of Source Organism

	Homo sapiens (556)
	synthetic construct (147)
	Arabidopsis thaliana (58)
	Bos taurus (55)
	Escherichia coli (52)
	Escherichia coli K-12 (48)
	Mus musculus (48)
	Thermus thermophilus HB8 (42)
	Rattus norvegicus (41)
	Saccharomyces cerevisiae (33)

More...

Taxonomy

	Eukaryota (843)
	Bacteria (406)
	other sequences (148)
	Riboviria (81)
	Archaea (25)
	Varidnaviria (13)
	Duplodnaviria (6)
	unclassified sequences (6)
	Monodnaviria (5)
	Eukaryota (eukaryotes) (1)

Experimental Method

	X-RAY DIFFRACTION (873)
	ELECTRON MICROSCOPY (414)
	SOLUTION NMR (57)
	SOLID-STATE NMR (4)

Polymer Entity Type

	Protein (1,339)
	DNA (125)
	RNA (118)

Refinement Resolution (Å)

	1.0 - 1.5 (65)
	1.5 - 2.0 (234)
	2.0 - 2.5 (307)
	2.5 - 3.0 (307)
	3.0 - 3.5 (227)
	3.5 - 4.0 (87)
	4.0 - 4.5 (28)
	> 4.5 (31)

Release Date

	1990 - 1994 (12)
	1995 - 1999 (15)
	2000 - 2004 (80)
	2005 - 2009 (107)
	2010 - 2014 (236)
	2015 - 2019 (300)
	2020 - 2024 (563)
	2025 - 2029 (33)

Enzyme Classification Name

	Transferases (298)
	Hydrolases (321)
	Oxidoreductases (78)
	Ligases (39)
	Lyases (47)
	Translocases (31)
	Isomerases (31)

Membrane Protein Annotation

	PDBTM (248)
	mpstruc (180)
	MemProtMD (157)
	OPM (128)

Symmetry Type

	Asymmetric (864)
	Cyclic (390)
	Dihedral (102)
	Icosahedral (16)
	Helical (3)
	Octahedral (4)

SCOP Classification

	Alpha and beta proteins (a/b) (142)
	Alpha and beta proteins (a+b) (159)
	All beta proteins (124)
	All alpha proteins (49)
	Artifacts (89)
	Membrane and cell surface proteins and peptides (23)
	Multi-domain proteins (alpha and beta) (24)
	Coiled coil proteins (27)
	Small proteins (15)
	Low resolution protein structures (3)

More...

AllSelected

1 to 25 of 1,346 Structures

Page 1 of 54

Sort by

Explore in 3D

1AOG \| pdb_00001aog	Download File View File

TRYPANOSOMA CRUZI TRYPANOTHIONE REDUCTASE (OXIDIZED FORM)

Bond, C.S., Zhang, Y., Hunter, W.N.

(1996) Protein Sci 5: 52-61

Released	1997-09-17
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Trypanosoma cruzi
Macromolecule	TRYPANOTHIONE REDUCTASE (protein)
Unique Ligands	FAD, MAE

Explore in 3D

1BZL \| pdb_00001bzl	Download File View File

CRYSTAL STRUCTURE OF TRYPANOSOMA CRUZI TRYPANOTHIONE REDUCTASE IN COMPLEX WITH TRYPANOTHIONE, AND THE STRUCTURE-BASED DISCOVERY OF NEW NATURAL PRODUCT INHIBITORS

Bond, C.S., Zhang, Y., Berriman, M., Cunningham, M., Fairlamb, A.H., Hunter, W.N.

(1999) Structure 7: 81-89

Released	1999-11-10
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Trypanosoma cruzi
Macromolecule	TRYPANOTHIONE REDUCTASE (OXIDIZED FORM) (protein)
Unique Ligands	FAD, GCG

Explore in 3D

1C21 \| pdb_00001c21	Download File View File

E. COLI METHIONINE AMINOPEPTIDASE: METHIONINE COMPLEX

Lowther, W.T., Zhang, Y., Sampson, P.B., Honek, J.F., Matthews, B.W.

(1999) Biochemistry 38: 14810-14819

Released	1999-11-17
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Escherichia coli
Macromolecule	METHIONINE AMINOPEPTIDASE (protein)
Unique Ligands	CO, MET, NA

Explore in 3D

1C22 \| pdb_00001c22	Download File View File

E. COLI METHIONINE AMINOPEPTIDASE: TRIFLUOROMETHIONINE COMPLEX

Lowther, W.T., Zhang, Y., Sampson, P.B., Honek, J.F., Matthews, B.W.

(1999) Biochemistry 38: 14810-14819

Released	1999-11-17
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Escherichia coli
Macromolecule	METHIONINE AMINOPEPTIDASE (protein)
Unique Ligands	CO, MF3, NA

Explore in 3D

1C23 \| pdb_00001c23	Download File View File

E. COLI METHIONINE AMINOPEPTIDASE: METHIONINE PHOSPHONATE COMPLEX

Lowther, W.T., Zhang, Y., Sampson, P.B., Honek, J.F., Matthews, B.W.

(1999) Biochemistry 38: 14810-14819

Released	1999-11-17
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	METHIONINE AMINOPEPTIDASE (protein)
Unique Ligands	CO, MPH, NA

Explore in 3D

1C24 \| pdb_00001c24	Download File View File

E. COLI METHIONINE AMINOPEPTIDASE: METHIONINE PHOSPHINATE COMPLEX

Lowther, W.T., Zhang, Y., Sampson, P.B., Honek, J.F., Matthews, B.W.

(1999) Biochemistry 38: 14810-14819

Released	1999-11-17
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Escherichia coli
Macromolecule	METHIONINE AMINOPEPTIDASE (protein)
Unique Ligands	CO, MPJ, NA

Explore in 3D

1C27 \| pdb_00001c27	Download File View File

E. COLI METHIONINE AMINOPEPTIDASE:NORLEUCINE PHOSPHONATE COMPLEX

Lowther, W.T., Zhang, Y., Sampson, P.B., Honek, J.F., Matthews, B.W.

(1999) Biochemistry 38: 14810-14819

Released	1999-11-17
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Escherichia coli
Macromolecule	METHIONINE AMINOPEPTIDASE (protein)
Unique Ligands	CO, NA, NLP

Explore in 3D

1F46 \| pdb_00001f46	Download File View File

THE BACTERIAL CELL-DIVISION PROTEIN ZIPA AND ITS INTERACTION WITH AN FTSZ FRAGMENT REVEALED BY X-RAY CRYSTALLOGRAPHY

Mosyak, L., Zhang, Y., Glasfeld, E., Stahl, M., Somers, W.S.

(2000) EMBO J 19: 3179-3191

Released	2001-06-13
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Escherichia coli
Macromolecule	CELL DIVISION PROTEIN ZIPA (protein)

Explore in 3D

1F47 \| pdb_00001f47	Download File View File

THE BACTERIAL CELL-DIVISION PROTEIN ZIPA AND ITS INTERACTION WITH AN FTSZ FRAGMENT REVEALED BY X-RAY CRYSTALLOGRAPHY

Mosyak, L., Zhang, Y., Glasfeld, E., Stahl, M., Somers, W.S.

(2000) EMBO J 19: 3179-3191

Released	2001-06-13
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Escherichia coli
Macromolecule	CELL DIVISION PROTEIN FTSZ (protein) CELL DIVISION PROTEIN ZIPA (protein)

Explore in 3D

1FBC \| pdb_00001fbc	Download File View File

CRYSTALLOGRAPHIC STUDIES OF THE CATALYTIC MECHANISM OF THE NEUTRAL FORM OF FRUCTOSE-1,6-BISPHOSPHATASE

Zhang, Y., Liang, J.-Y., Huang, S., Ke, H., Lipscomb, W.N.

(1993) Biochemistry 32: 1844-1857

Released	1993-10-31
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Sus scrofa
Macromolecule	FRUCTOSE 1,6-BISPHOSPHATASE (protein)
Unique Ligands	AHG, MG

Explore in 3D

1FBD \| pdb_00001fbd	Download File View File

CRYSTALLOGRAPHIC STUDIES OF THE CATALYTIC MECHANISM OF THE NEUTRAL FORM OF FRUCTOSE-1,6-BISPHOSPHATASE

Zhang, Y., Liang, J.-Y., Huang, S., Ke, H., Lipscomb, W.N.

(1993) Biochemistry 32: 1844-1857

Released	1993-10-31
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Sus scrofa
Macromolecule	FRUCTOSE 1,6-BISPHOSPHATASE (protein)
Unique Ligands	AHG, MN

Explore in 3D

1FBE \| pdb_00001fbe	Download File View File

CRYSTALLOGRAPHIC STUDIES OF THE CATALYTIC MECHANISM OF THE NEUTRAL FORM OF FRUCTOSE-1,6-BISPHOSPHATASE

Zhang, Y., Liang, J.-Y., Huang, S., Ke, H., Lipscomb, W.N.

(1993) Biochemistry 32: 1844-1857

Released	1993-10-31
Method	X-RAY DIFFRACTION 3 Å
Organisms	Sus scrofa
Macromolecule	FRUCTOSE 1,6-BISPHOSPHATASE (protein)
Unique Ligands	AHG, ZN

Explore in 3D

1FBF \| pdb_00001fbf	Download File View File

CRYSTALLOGRAPHIC STUDIES OF THE CATALYTIC MECHANISM OF THE NEUTRAL FORM OF FRUCTOSE-1,6-BISPHOSPHATASE

Zhang, Y., Liang, J.-Y., Huang, S., Ke, H., Lipscomb, W.N.

(1993) Biochemistry 32: 1844-1857

Released	1993-10-31
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Sus scrofa
Macromolecule	FRUCTOSE 1,6-BISPHOSPHATASE (protein)
Unique Ligands	AHM, MG

Explore in 3D

1FBG \| pdb_00001fbg	Download File View File

CRYSTALLOGRAPHIC STUDIES OF THE CATALYTIC MECHANISM OF THE NEUTRAL FORM OF FRUCTOSE-1,6-BISPHOSPHATASE

Zhang, Y., Liang, J.-Y., Huang, S., Ke, H., Lipscomb, W.N.

(1993) Biochemistry 32: 1844-1857

Released	1993-10-31
Method	X-RAY DIFFRACTION 3 Å
Organisms	Sus scrofa
Macromolecule	FRUCTOSE 1,6-BISPHOSPHATASE (protein)
Unique Ligands	AHM, MN

Explore in 3D

1FBH \| pdb_00001fbh	Download File View File

CRYSTALLOGRAPHIC STUDIES OF THE CATALYTIC MECHANISM OF THE NEUTRAL FORM OF FRUCTOSE-1,6-BISPHOSPHATASE

Zhang, Y., Liang, J.-Y., Huang, S., Ke, H., Lipscomb, W.N.

(1993) Biochemistry 32: 1844-1857

Released	1993-10-31
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Sus scrofa
Macromolecule	FRUCTOSE 1,6-BISPHOSPHATASE (protein)
Unique Ligands	AFP, FBP

Explore in 3D

1FBP \| pdb_00001fbp	Download File View File

CRYSTAL STRUCTURE OF FRUCTOSE-1,6-BISPHOSPHATASE COMPLEXED WITH FRUCTOSE 6-PHOSPHATE, AMP, AND MAGNESIUM

Ke, H., Zhang, Y., Lipscomb, W.N.

(1990) Proc Natl Acad Sci U S A 87: 5243-5247

Released	1992-04-15
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Sus scrofa
Macromolecule	FRUCTOSE 1,6-BISPHOSPHATASE (protein)
Unique Ligands	AMP, F6P, MG

Explore in 3D

1FKC \| pdb_00001fkc	Download File View File

HUMAN PRION PROTEIN (MUTANT E200K) FRAGMENT 90-231

Zhang, Y., Swietnicki, W., Zagorski, M.G., Surewicz, W.K., Soennichsen, F.D.

(2000) J Biological Chem 275: 33650-33654

Released	2000-09-21
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	PRION PROTEIN (protein)

Explore in 3D

1FNL \| pdb_00001fnl	Download File View File

CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAIN OF A HUMAN FCGRIII

Zhang, Y., Boesen, C.C., Radaev, S., Brooks, A.G., Fridman, W.H., Sautes-Fridman, C., Sun, P.D.

(2000) Immunity 13: 387-395

Released	2000-11-22
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	LOW AFFINITY IMMUNOGLOBULIN GAMMA FC REGION RECEPTOR III-B (protein)
Unique Ligands	HG