RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Citation Author = "Chavas, L.M.G."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 5 Structures.

Refinements

Structure Determination Methodology

experimental (5)

Scientific Name of Source Organism

	Mycobacterium tuberculosis (3)
	Homo sapiens (1)
	Severe acute respiratory syndrome coronavirus 2 (1)
	synthetic construct (1)

Taxonomy

	Bacteria (3)
	Eukaryota (1)
	Riboviria (1)
	other sequences (1)

Experimental Method

	X-RAY DIFFRACTION (4)
	ELECTRON MICROSCOPY (1)

Polymer Entity Type

Protein (5)

Refinement Resolution (Å)

	1.5 - 2.0 (4)
	3.0 - 3.5 (1)

Release Date

2020 - 2024 (5)

Enzyme Classification Name

	Lyases (3)
	Hydrolases (2)

Symmetry Type

	Dihedral (3)
	Asymmetric (1)
	Cyclic (1)

SCOP Classification

Alpha and beta proteins (a/b) (2)

AllSelected

1 to 5 of 5 Structures

Page 1 of 1

Sort by

Explore in 3D

6VB9 \| pdb_00006vb9	Download File View File

Covalent adduct of cis-2,3-epoxysuccinic acid with Isocitrate Lyase-1 from Mycobacterium tuberculosis

Krieger, I.V., Pham, T.V., Meek, T.D., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)

(2021) ACS Chem Biol 16: 463-470

Released	2020-12-30
Method	X-RAY DIFFRACTION 1.881 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	Isocitrate lyase (protein)
Unique Ligands	ACY, MG, OXD, PEG

Explore in 3D

6WSI \| pdb_00006wsi	Download File View File

Intact cis-2,3-epoxysuccinic acid bound to Isocitrate Lyase-1 from Mycobacterium tuberculosis

Krieger, I.V., Mellott, D., Meek, T.D., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)

(2021) ACS Chem Biol 16: 463-470

Released	2021-03-24
Method	X-RAY DIFFRACTION 1.749 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	Isocitrate lyase (protein)
Unique Ligands	GLV, GOL, MG, PEG, U9S

Explore in 3D

7KFZ \| pdb_00007kfz	Download File View File

Structure of a ternary KRas(G13D)-SOS complex

Liu, C., Moghadamchargari, Z., Laganowsky, A., Zhao, M.

(2021) Proc Natl Acad Sci U S A 118:

Released	2021-03-31
Method	ELECTRON MICROSCOPY 3.47 Å
Organisms	Homo sapiens
Macromolecule	GTPase KRas (protein) Son of sevenless homolog 1 (protein)
Unique Ligands	GNP, MG

Explore in 3D

7M2P \| pdb_00007m2p	Download File View File

Structure of the SARS-CoV-2 3CL protease in complex with inhibitor 18

Yang, K., Li, L.

(2021) J Med Chem 64: 11267-11287

Released	2021-08-25
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Severe acute respiratory syndrome coronavirus 2 synthetic construct
Macromolecule	3C-like proteinase (protein) Inhibitor 18 in bound form (protein)

Explore in 3D

7RB1 \| pdb_00007rb1	Download File View File

Isocitrate Lyase-1 from Mycobacterium tuberculosis covalently modified by 5-descarboxy-5-nitro-D-isocitric acid

Krieger, I.V., Mellott, D., Meek, T., Sacchettini, J.C.

(2021) J Am Chem Soc 143: 17666-17676

Released	2021-12-01
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	Isocitrate lyase (protein)
Unique Ligands	48J, 54I, GLV, GOL, MG

1 to 5 of 5 Structures

Page 1 of 1

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

6VB9 | pdb_00006vb9

Covalent adduct of cis-2,3-epoxysuccinic acid with Isocitrate Lyase-1 from Mycobacterium tuberculosis

6WSI | pdb_00006wsi

Intact cis-2,3-epoxysuccinic acid bound to Isocitrate Lyase-1 from Mycobacterium tuberculosis

7KFZ | pdb_00007kfz

Structure of a ternary KRas(G13D)-SOS complex

7M2P | pdb_00007m2p

Structure of the SARS-CoV-2 3CL protease in complex with inhibitor 18

7RB1 | pdb_00007rb1

Isocitrate Lyase-1 from Mycobacterium tuberculosis covalently modified by 5-descarboxy-5-nitro-D-isocitric acid

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

6VB9 | pdb_00006vb9

Covalent adduct of cis-2,3-epoxysuccinic acid with Isocitrate Lyase-1 from Mycobacterium tuberculosis

6WSI | pdb_00006wsi

Intact cis-2,3-epoxysuccinic acid bound to Isocitrate Lyase-1 from Mycobacterium tuberculosis

7KFZ | pdb_00007kfz

Structure of a ternary KRas(G13D)-SOS complex

7M2P | pdb_00007m2p

Structure of the SARS-CoV-2 3CL protease in complex with inhibitor 18

7RB1 | pdb_00007rb1

Isocitrate Lyase-1 from Mycobacterium tuberculosis covalently modified by 5-descarboxy-5-nitro-D-isocitric acid