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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Cobbold, S.A."

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Search Summary

This query matches 18 Structures.

Refinements

Structure Determination Methodology

experimental (18)

Scientific Name of Source Organism

	Homo sapiens (8)
	Leishmania mexicana MHOM/GT/2001/U1103 (5)
	Pediculus humanus corporis (5)

Taxonomy

Eukaryota (18)

Experimental Method

	X-RAY DIFFRACTION (11)
	ELECTRON MICROSCOPY (7)

Polymer Entity Type

Protein (18)

Refinement Resolution (Å)

	1.5 - 2.0 (6)
	2.0 - 2.5 (5)
	2.5 - 3.0 (2)
	3.0 - 3.5 (4)
	3.5 - 4.0 (1)

Release Date

	2015 - 2019 (5)
	2020 - 2024 (10)
	2025 - 2029 (3)

Enzyme Classification Name

Transferases (13)

Membrane Protein Annotation

PDBTM (3)

Symmetry Type

	Asymmetric (9)
	Cyclic (8)
	Dihedral (1)

SCOP Classification

	All beta proteins (4)
	Artifacts (2)

AllSelected

1 to 18 of 18 Structures

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6Q4W \| pdb_00006q4w	Download File View File

Structure of MPT-1, a GDP-Man-dependent mannosyltransferase from Leishmania mexicana

Sobala, L.F., Males, A., Bastidas, L.M., Ward, T., Sernee, M.F., Ralton, J.E., Nero, T.L., Cobbold, S., Kloehn, J., Viera-Lara, M., Stanton, L., Hanssen, E., Parker, M.W., Williams, S.J., McConville, M.J., Davies, G.J.

(2019) Cell Host Microbe 26: 385-399.e9

Released	2019-09-18
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Leishmania mexicana MHOM/GT/2001/U1103
Macromolecule	LmxM MPT-1 (protein)

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6Q4X \| pdb_00006q4x	Download File View File

Structure of MPT-2, a GDP-Man-dependent mannosyltransferase from Leishmania mexicana

(2019) Cell Host Microbe 26: 385-399.e9

Released	2019-09-18
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Leishmania mexicana MHOM/GT/2001/U1103
Macromolecule	Uncharacterized protein (protein)
Unique Ligands	NA

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6Q4Y \| pdb_00006q4y	Download File View File

Structure of MPT-2, a GDP-Man-dependent mannosyltransferase from Leishmania mexicana, in complex with mannose

(2019) Cell Host Microbe 26: 385-399.e9

Released	2019-09-18
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Leishmania mexicana MHOM/GT/2001/U1103
Macromolecule	LmxM MPT-2 (protein)
Unique Ligands	BMA, MAN

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6Q4Z \| pdb_00006q4z	Download File View File

Structure of an inactive variant (D94N) of MPT-2, a GDP-Man-dependent mannosyltransferase from Leishmania mexicana, in complex with beta-1,2-mannobiose

Sobala, L.F., Males, A., Bastidas, L.M., Ward, T., Sernee, M.F., Ralton, J.E., Nero, T.L., Kloehn, J., Viera-Lara, M., Stanton, L., Cobbold, S., Pires, D.E., Hanssen, E., Parker, M.W., Ascher, D.B., Williams, S.J., McConville, M.J., Davies, G.J.

(2019) Cell Host Microbe 26: 385-399.e9

Released	2019-09-25
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Leishmania mexicana MHOM/GT/2001/U1103
Macromolecule	LmxM MPT-2 D94N (protein)
Unique branched monosaccharides	BMA, MAN

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6Q50 \| pdb_00006q50	Download File View File

Structure of MPT-4, a mannose phosphorylase from Leishmania mexicana, in complex with phosphate ion

(2019) Cell Host Microbe 26: 385-399.e9

Released	2019-09-25
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Leishmania mexicana MHOM/GT/2001/U1103
Macromolecule	MPT-4 (protein)
Unique Ligands	EDO, NA, PO4

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7M4M \| pdb_00007m4m	Download File View File

Crystal structure of RBR E3 ligase RNF216 with ubiquitin

Cotton, T.R., Lechtenberg, B.C.

(2022) Mol Cell 82: 598-615.e8

Released	2022-01-05
Method	X-RAY DIFFRACTION 2.39 Å
Organisms	Homo sapiens
Macromolecule	E3 ubiquitin-protein ligase RNF216 (protein) Ubiquitin (protein)
Unique Ligands	GOL, ZN

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7M4N \| pdb_00007m4n	Download File View File

Crystal structure of RBR E3 ligase RNF216 in complex with K63-linked di-ubiquitin

Cotton, T.R., Lechtenberg, B.C.

(2022) Mol Cell 82: 598-615.e8

Released	2022-01-05
Method	X-RAY DIFFRACTION 2.52 Å
Organisms	Homo sapiens
Macromolecule	E3 ubiquitin-protein ligase RNF216 (protein) Ubiquitin (protein)
Unique Ligands	GOL, SO4, ZN

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7M4O \| pdb_00007m4o	Download File View File

Crystal structure of phosphorylated RBR E3 ligase RNF216 in complex with K63-linked di-ubiquitin

Cotton, T.R., Lechtenberg, B.C.

(2022) Mol Cell 82: 598-615.e8

Released	2022-01-05
Method	X-RAY DIFFRACTION 2.21 Å
Organisms	Homo sapiens
Macromolecule	E3 ubiquitin-protein ligase RNF216 (protein) Ubiquitin (protein)
Unique Ligands	GOL, PG0, SO4, ZN

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7T3X \| pdb_00007t3x	Download File View File

Structure of unphosphorylated Pediculus humanus (Ph) PINK1 D334A mutant

Gan, Z.Y., Leis, A., Dewson, G., Glukhova, A., Komander, D.

(2022) Nature 602: 328-335

Released	2021-12-22
Method	X-RAY DIFFRACTION 3.53 Å
Organisms	Pediculus humanus corporis
Macromolecule	Serine/threonine-protein kinase PINK1 (protein)

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7T4K \| pdb_00007t4k	Download File View File

Structure of dimeric phosphorylated Pediculus humanus (Ph) PINK1 with kinked alpha-C helix in chain B

Gan, Z.Y., Leis, A., Dewson, G., Glukhova, A., Komander, D.

(2022) Nature 602: 328-335

Released	2022-01-12
Method	ELECTRON MICROSCOPY 3.25 Å
Organisms	Pediculus humanus corporis
Macromolecule	Serine/threonine-protein kinase PINK1, putative (protein)

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7T4L \| pdb_00007t4l	Download File View File

Structure of dimeric phosphorylated Pediculus humanus (Ph) PINK1 with extended alpha-C helix in chain B

Gan, Z.Y., Leis, A., Dewson, G., Glukhova, A., Komander, D.

(2022) Nature 602: 328-335

Released	2022-01-12
Method	ELECTRON MICROSCOPY 3.28 Å
Organisms	Pediculus humanus corporis
Macromolecule	Serine/threonine-protein kinase PINK1, putative (protein)

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7T4M \| pdb_00007t4m	Download File View File

Structure of dodecameric unphosphorylated Pediculus humanus (Ph) PINK1 D357A mutant

Gan, Z.Y., Leis, A., Dewson, G., Glukhova, A., Komander, D.

(2022) Nature 602: 328-335

Released	2022-01-12
Method	ELECTRON MICROSCOPY 2.48 Å
Organisms	Pediculus humanus corporis
Macromolecule	Serine/threonine-protein kinase PINK1, putative (protein)

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7T4N \| pdb_00007t4n	Download File View File

Structure of dimeric unphosphorylated Pediculus humanus (Ph) PINK1 D357A mutant

Gan, Z.Y., Leis, A., Dewson, G., Glukhova, A., Komander, D.

(2022) Nature 602: 328-335

Released	2022-01-12
Method	ELECTRON MICROSCOPY 2.35 Å
Organisms	Pediculus humanus corporis
Macromolecule	Serine/threonine-protein kinase PINK1, putative (protein)

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9EGV \| pdb_00009egv	Download File View File

HOIL-1 RING2 domain bound to ubiquitin

Wang, X.S., Lechtenberg, B.C.

(2024) bioRxiv

Released	2024-12-11
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Polyubiquitin-C (protein) RanBP-type and C3HC4-type zinc finger-containing protein 1 (protein)
Unique Ligands	CL, SO4, ZN

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9EGW \| pdb_00009egw	Download File View File

HOIL-1 RING2 domain bound to ubiquitin-maltose (maltose not modelled)

Wang, X.S., Lechtenberg, B.C.

(2024) bioRxiv

Released	2024-12-11
Method	X-RAY DIFFRACTION 1.78 Å
Organisms	Homo sapiens
Macromolecule	Polyubiquitin-C (protein) RanBP-type and C3HC4-type zinc finger-containing protein 1 (protein)
Unique Ligands	CL, SO4, ZN