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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Glickman, M.S."

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Search Summary

This query matches 51 Structures.

Refinements

Structure Determination Methodology

experimental (51)

Scientific Name of Source Organism

	Saccharomyces cerevisiae (12)
	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (10)
	Homo sapiens (7)
	HIV-1 M:B_HXB2R (3)
	Human immunodeficiency virus 1 (3)
	Human immunodeficiency virus type 1 (3)
	Human immunodeficiency virus (2)
	Bos taurus (1)
	Ebola virus - Mayinga, Zaire, 1976 (1)
	Friend murine leukemia virus (1)

More...

Taxonomy

	Eukaryota (21)
	Riboviria (12)
	Eukaryota (eukaryotes) (10)
	Riboviria (RNA viruses and viroids) (4)
	other sequences (1)

Experimental Method

	X-RAY DIFFRACTION (48)
	SOLUTION NMR (3)

Polymer Entity Type

	Protein (51)
	DNA (1)

Refinement Resolution (Å)

	1.0 - 1.5 (4)
	1.5 - 2.0 (25)
	2.0 - 2.5 (17)
	2.5 - 3.0 (2)

Release Date

	1990 - 1994 (2)
	1995 - 1999 (22)
	2000 - 2004 (16)
	2005 - 2009 (4)
	2015 - 2019 (4)
	2020 - 2024 (3)

Enzyme Classification Name

Transferases (1)

Symmetry Type

	Cyclic (37)
	Asymmetric (15)
	Dihedral (1)
	Helical (1)

SCOP Classification

	Coiled coil proteins (37)
	All alpha proteins (2)
	Designed proteins (3)
	All beta proteins (4)
	Small proteins (1)

AllSelected

1 to 25 of 51 Structures

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1AIK \| pdb_00001aik	Download File View File

HIV GP41 CORE STRUCTURE

Chan, D.C., Fass, D., Berger, J.M., Kim, P.S.

(1997) Cell 89: 263-273

Released	1997-06-16
Method	X-RAY DIFFRACTION 2 Å
Organisms	HIV-1 M:B_HXB2R
Macromolecule	HIV-1 GP41 GLYCOPROTEIN (protein)

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1AJJ \| pdb_00001ajj	Download File View File

LDL RECEPTOR LIGAND-BINDING MODULE 5, CALCIUM-COORDINATING

Fass, D., Blacklow, S.C., Kim, P.S., Berger, J.M.

(1997) Nature 388: 691-693

Released	1997-07-07
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	LOW-DENSITY LIPOPROTEIN RECEPTOR (protein)
Unique Ligands	CA, SO4

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1AOL \| pdb_00001aol	Download File View File

FRIEND MURINE LEUKEMIA VIRUS RECEPTOR-BINDING DOMAIN

Fass, D., Davey, R.A., Hamson, C.A., Kim, P.S., Cunningham, J.M., Berger, J.M.

(1997) Science 277: 1662-1666

Released	1997-10-15
Method	X-RAY DIFFRACTION 2 Å
Organisms	Friend murine leukemia virus
Macromolecule	GP70 (protein)
Unique Ligands	NAG, ZN

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1C94 \| pdb_00001c94	Download File View File

REVERSING THE SEQUENCE OF THE GCN4 LEUCINE ZIPPER DOES NOT AFFECT ITS FOLD.

Mittl, P.R.E., Deillon, C.A., Sargent, D., Liu, N., Klauser, S., Thomas, R.M., Gutte, B., Gruetter, M.G.

(2000) Proc Natl Acad Sci U S A 97: 2562-2566

Released	2000-03-22
Method	X-RAY DIFFRACTION 2.08 Å
Macromolecule	RETRO-GCN4 LEUCINE ZIPPER (protein)

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1CE0 \| pdb_00001ce0	Download File View File

TRIMERIZATION SPECIFICITY IN HIV-1 GP41: ANALYSIS WITH A GCN4 LEUCINE ZIPPER MODEL

Shu, W., Ji, H., Lu, M.

(1999) Biochemistry 38: 5378-5385

Released	1999-03-19
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	PROTEIN (LEUCINE ZIPPER MODEL H38-P1) (protein)

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1CE9 \| pdb_00001ce9	Download File View File

HELIX CAPPING IN THE GCN4 LEUCINE ZIPPER

Lu, M., Shu, W., Ji, H., Spek, E., Wang, L.-Y., Kallenbach, N.R.

(1999) J Mol Biology 288: 743-752

Released	1999-03-25
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Macromolecule	PROTEIN (GCN4-PMSE) (protein)

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1CZQ \| pdb_00001czq	Download File View File

CRYSTAL STRUCTURE OF THE D10-P1/IQN17 COMPLEX: A D-PEPTIDE INHIBITOR OF HIV-1 ENTRY BOUND TO THE GP41 COILED-COIL POCKET.

Eckert, D.M., Malashkevich, V.N., Hong, L.H., Carr, P.A., Kim, P.S.

(1999) Cell 99: 103-115

Released	1999-10-13
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Human immunodeficiency virus Saccharomyces cerevisiae
Macromolecule	D-PEPTIDE INHIBITOR (protein) FUSION PROTEIN BETWEEN THE HYDROPHOBIC POCKET OF HIV GP41 AND GCN4-PIQI (protein)
Unique Ligands	CL

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1G2C \| pdb_00001g2c	Download File View File

HUMAN RESPIRATORY SYNCYTIAL VIRUS FUSION PROTEIN CORE

Zhao, X., Singh, M., Malashkevich, V.N., Kim, P.S.

(2000) Proc Natl Acad Sci U S A 97: 14172-14177

Released	2001-01-03
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Human respiratory syncytial virus strain RSS-2
Macromolecule	FUSION PROTEIN (F) (protein)

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1GCL \| pdb_00001gcl	Download File View File

GCN4 LEUCINE ZIPPER CORE MUTANT P-LI

Harbury, P.B., Zhang, T., Kim, P.S., Alber, T.

(1993) Science 262: 1401-1407

Released	1995-06-03
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	GCN4 (protein)

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1GCM \| pdb_00001gcm	Download File View File

GCN4 LEUCINE ZIPPER CORE MUTANT P-LI

Harbury, P.B., Kim, P.S., Alber, T.

(1994) Nature 371: 80-83

Released	1996-01-29
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	GCN4P-II (protein)

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1GZL \| pdb_00001gzl	Download File View File

Crystal structure of C14linkmid/IQN17: a cross-linked inhibitor of HIV-1 entry bound to the gp41 hydrophobic pocket

Sia, S.K., Carr, P.A., Cochran, A.G., Malashkevich, V.M., Kim, P.S.

(2002) Proc Natl Acad Sci U S A 99: 14664

Released	2002-10-10
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Human immunodeficiency virus Human immunodeficiency virus 1 Saccharomyces cerevisiae
Macromolecule	ENVELOPE GLYCOPROTEIN GP41 (protein) FUSION PROTEIN BETWEEN THE HYDROPHOBIC POCKET OF HIV GP41 AND GENERAL CONTROL PROTEIN GCN4-PIQI (protein)
Unique Ligands	CL, N2P

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1IJ0 \| pdb_00001ij0	Download File View File

Coiled Coil Trimer GCN4-pVLS Ser at Buried D Position

Akey, D.L., Malashkevich, V.N., Kim, P.S.

(2001) Biochemistry 40: 6352-6360

Released	2001-08-08
Method	X-RAY DIFFRACTION 1.86 Å
Organisms	Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Macromolecule	GENERAL CONTROL PROTEIN GCN4 (protein)
Unique Ligands	ZN

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1IJ1 \| pdb_00001ij1	Download File View File

GCN4-pVLT Coiled-coil Trimer with Threonine at the d(12) Position

Akey, D.L., Malashkevich, V.N., Kim, P.S.

(2001) Biochemistry 40: 6352-6360

Released	2001-08-08
Method	X-RAY DIFFRACTION 1.86 Å
Organisms	Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Macromolecule	GENERAL CONTROL PROTEIN GCN4 (protein)
Unique Ligands	ZN

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1IJ2 \| pdb_00001ij2	Download File View File

GCN4-pVTL Coiled-coil Trimer with Threonine at the a(16) position

Akey, D.L., Malashkevich, V.N., Kim, P.S.

(2001) Biochemistry 40: 6352-6360

Released	2001-08-08
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Macromolecule	GENERAL CONTROL PROTEIN GCN4 (protein)
Unique Ligands	CD

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1IJ3 \| pdb_00001ij3	Download File View File

GCN4-pVSL Coiled-coil trimer with Serine at the a(16) position

Akey, D.L., Malashkevich, V.N., Kim, P.S.

(2001) Biochemistry 40: 6352-6360

Released	2001-08-08
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Macromolecule	general control protein GCN4 (protein)

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1JEK \| pdb_00001jek	Download File View File

Visna TM CORE STRUCTURE

Malashkevich, V.N., Singh, M., Kim, P.S.

(2001) Proc Natl Acad Sci U S A 98: 8502-8506

Released	2001-07-25
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Maedi visna virus (strain KV1772)
Macromolecule	ENV POLYPROTEIN (protein)

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1JUN \| pdb_00001jun	Download File View File

NMR STUDY OF C-JUN HOMODIMER

Junius, F.K., O'Donoghue, S.I., Nilges, M., King, G.F.

(1996) J Biological Chem 271: 13663-13667

Released	1996-06-20
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	C-JUN HOMODIMER (protein)

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1K1F \| pdb_00001k1f	Download File View File

Structure of the Bcr-Abl Oncoprotein Oligomerization domain

Zhao, X., Ghaffari, S., Lodish, H., Malashkevich, V.N., Kim, P.S.

(2002) Nat Struct Biol 9: 117-120

Released	2002-02-06
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	BREAKPOINT CLUSTER REGION PROTEIN (protein)

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1KD8 \| pdb_00001kd8	Download File View File

X-RAY STRUCTURE OF THE COILED COIL GCN4 ACID BASE HETERODIMER ACID-d12Ia16V BASE-d12La16L

Keating, A.E., Malashkevich, V.N., Tidor, B., Kim, P.S.

(2001) Proc Natl Acad Sci U S A 98: 14825-14830

Released	2001-11-28
Method	X-RAY DIFFRACTION 1.9 Å
Macromolecule	GCN4 ACID BASE HETERODIMER ACID-d12Ia16V (protein) GCN4 ACID BASE HETERODIMER BASE-d12La16L (protein)

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1KD9 \| pdb_00001kd9	Download File View File

X-RAY STRUCTURE OF THE COILED COIL GCN4 ACID BASE HETERODIMER ACID-d12La16L BASE-d12La16L

Keating, A.E., Malashkevich, V.N., Tidor, B., Kim, P.S.

(2001) Proc Natl Acad Sci U S A 98: 14825-14830

Released	2001-11-28
Method	X-RAY DIFFRACTION 2.1 Å
Macromolecule	GCN4 ACID BASE HETERODIMER ACID-d12La16L (protein) GCN4 ACID BASE HETERODIMER BASE-d12La16L (protein)

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1KDD \| pdb_00001kdd	Download File View File

X-ray structure of the coiled coil GCN4 ACID BASE HETERODIMER ACID-d12La16I BASE-d12La16L

Keating, A.E., Malashkevich, V.N., Tidor, B., Kim, P.S.

(2001) Proc Natl Acad Sci U S A 98: 14825-14830

Released	2001-11-28
Method	X-RAY DIFFRACTION 2.14 Å
Macromolecule	GCN4 ACID BASE HETERODIMER ACID-d12La16I (protein) GCN4 ACID BASE HETERODIMER BASE-d12La16L (protein)

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1MOF \| pdb_00001mof	Download File View File

COAT PROTEIN

Fass, D., Harrison, S.C., Kim, P.S.

(1996) Nat Struct Biol 3: 465-469

Released	1996-10-14
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Moloney murine leukemia virus
Macromolecule	MOLONEY MURINE LEUKEMIA VIRUS P15 (protein)
Unique Ligands	CL

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1PIQ \| pdb_00001piq	Download File View File

CRYSTAL STRUCTURE OF GCN4-PIQ, A TRIMERIC COILED COIL WITH BURIED POLAR RESIDUES

Eckert, D.M., Malashkevich, V.N., Kim, P.S.

(1998) J Mol Biology 284: 859-865

Released	1998-09-30
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Macromolecule	PROTEIN (GENERAL CONTROL PROTEIN GCN4-PIQ) (protein)
Unique Ligands	CL

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1RB4 \| pdb_00001rb4	Download File View File

ANTIPARALLEL TRIMER OF GCN4-LEUCINE ZIPPER CORE MUTANT AS N16A TETRAGONAL AUTOMATIC SOLUTION

Holton, J., Alber, T.

(2004) Proc Natl Acad Sci U S A 101: 1537-1542

Released	2004-01-13
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Macromolecule	General control protein GCN4 (protein)

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1RB5 \| pdb_00001rb5	Download File View File

ANTIPARALLEL TRIMER OF GCN4-LEUCINE ZIPPER CORE MUTANT AS N16A TRIGONAL FORM

Holton, J., Alber, T.

(2004) Proc Natl Acad Sci U S A 101: 1537-1542

Released	2004-01-13
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Macromolecule	General control protein GCN4 (protein)

1 to 25 of 51 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1AIK | pdb_00001aik

1AJJ | pdb_00001ajj

1AOL | pdb_00001aol

1C94 | pdb_00001c94

1CE0 | pdb_00001ce0

1CE9 | pdb_00001ce9

1CZQ | pdb_00001czq

1G2C | pdb_00001g2c

1GCL | pdb_00001gcl

1GCM | pdb_00001gcm

1GZL | pdb_00001gzl

1IJ0 | pdb_00001ij0

1IJ1 | pdb_00001ij1

1IJ2 | pdb_00001ij2

1IJ3 | pdb_00001ij3

1JEK | pdb_00001jek

1JUN | pdb_00001jun

1K1F | pdb_00001k1f

1KD8 | pdb_00001kd8

1KD9 | pdb_00001kd9

1KDD | pdb_00001kdd

1MOF | pdb_00001mof

1PIQ | pdb_00001piq

1RB4 | pdb_00001rb4

1RB5 | pdb_00001rb5