RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Citation Author = "Moraes, T.F."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 61 Structures.

Refinements

Structure Determination Methodology

experimental (61)

Scientific Name of Source Organism

	Actinobacillus pleuropneumoniae (12)
	Pseudomonas aeruginosa PAO1 (9)
	Casadabanvirus DMS3 (4)
	Haemophilus influenzae (4)
	Homo sapiens (4)
	Acinetobacter baumannii NIPH 201 (3)
	Neisseria meningitidis 8013 (3)
	Neisseria meningitidis MC58 (3)
	Neisseria meningitidis serogroup B (3)
	Pseudomonas phage JBD5 (3)

More...

Taxonomy

	Bacteria (53)
	Duplodnaviria (7)
	Eukaryota (4)
	other sequences (1)

Experimental Method

	X-RAY DIFFRACTION (60)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (61)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (20)
	2.0 - 2.5 (17)
	2.5 - 3.0 (13)
	3.0 - 3.5 (5)
	3.5 - 4.0 (2)
	4.0 - 4.5 (1)

Release Date

	2000 - 2004 (2)
	2005 - 2009 (5)
	2010 - 2014 (10)
	2015 - 2019 (26)
	2020 - 2024 (18)

Enzyme Classification Name

	Hydrolases (2)
	Ligases (1)
	Transferases (1)

Membrane Protein Annotation

	PDBTM (8)
	MemProtMD (7)
	OPM (3)
	mpstruc (2)

Symmetry Type

	Asymmetric (48)
	Cyclic (14)
	Dihedral (1)

SCOP Classification

	All beta proteins (9)
	Membrane and cell surface proteins and peptides (9)
	Alpha and beta proteins (a+b) (3)
	Alpha and beta proteins (a/b) (4)
	All alpha proteins (1)

AllSelected

1 to 25 of 61 Structures

Page 1 of 3

Sort by

Explore in 3D

1J74 \| pdb_00001j74	Download File View File

Crystal Structure of Mms2

Moraes, T.F., Edwards, R.A., McKenna, S., Pastushok, L., Xiao, W., Glover, J.N.M., Ellison, M.J.

(2001) Nat Struct Biol 8: 669-673

Released	2001-08-08
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	MMS2 (protein)

Explore in 3D

1J7D \| pdb_00001j7d	Download File View File

Crystal Structure of hMms2-hUbc13

Moraes, T.F., Edwards, R.A., McKenna, S., Pashushok, L., Xiao, W., Glover, J.N.M., Ellison, M.J.

(2001) Nat Struct Biol 8: 669-673

Released	2001-08-08
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Homo sapiens
Macromolecule	MMS2 (protein) UBIQUITIN-CONJUGATING ENZYME E2-17 KDA (protein)

Explore in 3D

2JW1 \| pdb_00002jw1	Download File View File

Structural characterization of the type III pilotin-secretin interaction in Shigella flexneri by NMR spectroscopy

Okon, M.S., Lario, P.I., Creagh, L., Jung, Y.M.T., Maurelli, A.T., Strynadka, N.C.J., McIntosh, L.P.

(2008) Structure 16: 1544-1554

Released	2008-09-02
Method	SOLUTION NMR
Organisms	Shigella flexneri synthetic construct
Macromolecule	Lipoprotein mxiM (protein) Outer membrane protein mxiD (protein)

Explore in 3D

2O4V \| pdb_00002o4v	Download File View File

An arginine ladder in OprP mediates phosphate specific transfer across the outer membrane

Moraes, T.F., Bains, M., Hancock, R.E., Strynadka, N.C.

(2007) Nat Struct Mol Biol 14: 85-87

Released	2006-12-26
Method	X-RAY DIFFRACTION 1.94 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	Porin P (protein)
Unique Ligands	C8E, CA, CL, GOL, PO4

Explore in 3D

3FFV \| pdb_00003ffv	Download File View File

Crystal Structure Analysis of Syd

Maurus, R., Brayer, G.D.

(2009) J Biological Chem 284: 7897-7902

Released	2009-01-27
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli K-12
Macromolecule	Protein syd (protein)

Explore in 3D

3HOE \| pdb_00003hoe	Download File View File

Crystal Structure of Surface Lipoprotein

Moraes, T.F., Yu, R.H., Schryvers, A.B., Strynadka, N.C.J.

(2009) Mol Cell 35: 523-533

Released	2009-10-06
Method	X-RAY DIFFRACTION 2.303 Å
Organisms	Actinobacillus pleuropneumoniae
Macromolecule	TbpB (protein)

Explore in 3D

3HOL \| pdb_00003hol	Download File View File

The Structure of Intact Ap-TbpB (N and C lobes)

Moraes, T.F., Yu, R.H., Schryvers, A.B., Strynadka, N.C.J.

(2009) Mol Cell 35: 523-533

Released	2009-10-06
Method	X-RAY DIFFRACTION 1.98 Å
Organisms	Actinobacillus pleuropneumoniae
Macromolecule	TbpB (protein)

Explore in 3D

3KN7 \| pdb_00003kn7	Download File View File

Crystal Structure of Haemophilus influenzae Y195A mutant Holo Ferric ion-Binding Protein A

Shouldice, S.R., Schryvers, A.B.

(2010) Biochem J

Released	2010-09-15
Method	X-RAY DIFFRACTION 1.71 Å
Organisms	Haemophilus influenzae
Macromolecule	Iron-utilization periplasmic protein (protein)
Unique Ligands	FE, PO4

Explore in 3D

3KN8 \| pdb_00003kn8	Download File View File

Crystal Structure of Haemophilus influenzae Y196A mutant Holo Ferric ion-Binding Protein A

Shouldice, S.R., Schryvers, A.B.

(2010) Biochem J

Released	2010-09-15
Method	X-RAY DIFFRACTION 1.89 Å
Organisms	Haemophilus influenzae
Macromolecule	Iron-utilization periplasmic protein (protein)
Unique Ligands	FE, PO4

Explore in 3D

3NY7 \| pdb_00003ny7	Download File View File

STAS domain of YchM bound to ACP

Moraes, T.F., Reithmeier, R., Strynadka, N.C.S.

(2010) Structure 18: 1450-1462

Released	2010-12-01
Method	X-RAY DIFFRACTION 1.922 Å
Organisms	Escherichia coli
Macromolecule	Acyl carrier protein (protein) Sulfate transporter (protein)
Unique Ligands	GOL, SXM

Explore in 3D

3OD7 \| pdb_00003od7	Download File View File

Haemophilus influenzae ferric binding protein A -Iron Loaded

Khambati, H.K., Moraes, T.F., Singh, J., Shouldice, S.R., Yu, R.H., Schryvers, A.B.

(2010) Biochem J

Released	2010-09-15
Method	X-RAY DIFFRACTION 1.801 Å
Organisms	Haemophilus influenzae
Macromolecule	Iron-utilization periplasmic protein (protein)
Unique Ligands	FE, PO4

Explore in 3D

3ODB \| pdb_00003odb	Download File View File

Haemophilus influenzae ferric binding protein A -Iron Loaded -open Conformation

Khambati, H.K., Moraes, T.F., Singh, J., Shouldice, S.R., Yu, R.H., Schryvers, A.B.

(2010) Biochem J

Released	2010-09-15
Method	X-RAY DIFFRACTION 1.62 Å
Organisms	Haemophilus influenzae
Macromolecule	Iron-utilization periplasmic protein (protein)
Unique Ligands	FE

Explore in 3D

3PQS \| pdb_00003pqs	Download File View File

The crystal structures of porcine pathogen ApH87_TbpB

Calmettes, C., Moraes, T.F.

(2011) J Biological Chem 286: 12683-12692

Released	2011-02-02
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Actinobacillus pleuropneumoniae
Macromolecule	transferrin-binding protein (protein)
Unique Ligands	CAC, GOL

Explore in 3D

3PQU \| pdb_00003pqu	Download File View File

The crystal structures of porcine pathogen AsH57_TbpB

Calmettes, C., Moraes, T.F.

(2011) J Biological Chem 286: 12683-12692

Released	2011-02-02
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Actinobacillus suis
Macromolecule	Transferrin binding protein B (protein)
Unique Ligands	GOL

Explore in 3D

3VE1 \| pdb_00003ve1	Download File View File

The 2.9 angstrom crystal structure of Transferrin binding protein B (TbpB) from serogroup B M982 Neisseria meningitidis in complex with human transferrin

Calmettes, C., Moraes, T.F.

(2012) Nat Struct Mol Biol 19: 358-360

Released	2012-02-22
Method	X-RAY DIFFRACTION 2.956 Å
Organisms	Homo sapiens Neisseria meningitidis serogroup B
Macromolecule	Serotransferrin (protein) Transferrin-binding protein 2 (protein)
Unique Ligands	CO3, FE, GOL

Explore in 3D

3VE2 \| pdb_00003ve2	Download File View File

The 2.1 angstrom crystal structure of Transferrin binding protein B (TbpB) from serogroup B M982 Neisseria meningitidis

Calmettes, C., Moraes, T.F.

(2012) Nat Struct Mol Biol 19: 358-360

Released	2012-02-22
Method	X-RAY DIFFRACTION 2.14 Å
Organisms	Neisseria meningitidis serogroup B
Macromolecule	Transferrin-binding protein 2 (protein)
Unique Ligands	ACT, GOL, NA, SO4

Explore in 3D

4KY9 \| pdb_00004ky9	Download File View File

Structural and Functional Analysis of a Putative Substrate Access Tunnel in the Cytosolic Domain of Human Anion Exchanger 1

Shnitsar, V., Calmettes, C., Reithmeier, R.A.F., Moraes, T.F.

(2013) J Biological Chem 288: 33848-33860

Released	2013-10-23
Method	X-RAY DIFFRACTION 2.23 Å
Organisms	Homo sapiens
Macromolecule	Band 3 anion transport protein (protein)

Explore in 3D

4O3W \| pdb_00004o3w	Download File View File

Crystal structure of the vaccine antigen Transferrin Binding Protein B (TbpB) mutant Tyr-63-Ala from Actinobacillus suis H57

Calmettes, C., Yu, R.H., Schryvers, A.B., Moraes, T.F.

(2015) Infect Immun 83: 1030-1038

Released	2015-01-14
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Actinobacillus suis
Macromolecule	Transferrin binding protein B (protein)
Unique Ligands	GOL, SO4

Explore in 3D

4O3X \| pdb_00004o3x	Download File View File

Crystal structure of the vaccine antigen Transferrin Binding Protein B (TbpB) mutant Phe-171-Ala from Actinobacillus pleuropneumoniae H49

Calmettes, C., Yu, R.H., Schryvers, A.B., Moraes, T.F.

(2015) Infect Immun 83: 1030-1038

Released	2015-01-14
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Actinobacillus pleuropneumoniae
Macromolecule	Transferrin binding protein B (protein)

Explore in 3D

4O3Y \| pdb_00004o3y	Download File View File

Crystal structure of the vaccine antigen Transferrin Binding Protein B (TbpB) mutant Arg-179-Glu from Actinobacillus pleuropneumoniae H87

Calmettes, C., Yu, R.H., Schryvers, A.B., Moraes, T.F.

(2015) Infect Immun 83: 1030-1038

Released	2015-01-14
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Actinobacillus pleuropneumoniae
Macromolecule	Outer membrane protein; transferrin-binding protein (protein)
Unique Ligands	ACT, GOL

Explore in 3D

4O3Z \| pdb_00004o3z	Download File View File

Crystal structure of the vaccine antigen Transferrin Binding Protein B (TbpB) mutant Tyr-95-Ala from Actinobacillus pleuropneumoniae H87

Calmettes, C., Yu, R.H., Schryvers, A.B., Moraes, T.F.

(2015) Infect Immun 83: 1030-1038

Released	2015-01-14
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Actinobacillus pleuropneumoniae
Macromolecule	Outer membrane protein; transferrin-binding protein (protein)
Unique Ligands	ACT, GOL

Explore in 3D

4O49 \| pdb_00004o49	Download File View File

Crystal structure of the vaccine antigen Transferrin Binding Protein B (TbpB) mutant Tyr-174-Ala from Actinobacillus pleuropneumoniae H87

Calmettes, C., Yu, R.H., Schryvers, A.B., Moraes, T.F.

(2015) Infect Immun 83: 1030-1038

Released	2015-01-14
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Actinobacillus pleuropneumoniae
Macromolecule	Outer membrane protein; transferrin-binding protein (protein)
Unique Ligands	ACT, GOL

Explore in 3D

4O4U \| pdb_00004o4u	Download File View File

Crystal structure of the vaccine antigen Transferrin Binding Protein B (TbpB) mutant Trp-176-Ala from Haemophilus parasuis Hp5

Calmettes, C., Yu, R.H., Schryvers, A.B., Moraes, T.F.

(2015) Infect Immun 83: 1030-1038

Released	2015-01-14
Method	X-RAY DIFFRACTION 2.64 Å
Organisms	Glaesserella parasuis
Macromolecule	TbpB (protein)
Unique Ligands	GOL

Explore in 3D

4O4X \| pdb_00004o4x	Download File View File

Crystal structure of the vaccine antigen Transferrin Binding Protein B (TbpB) double mutant Tyr-167-Ala and Trp-176-Ala from Haemophilus parasuis Hp5

Calmettes, C., Yu, R.H., Schryvers, A.B., Moraes, T.F.

(2015) Infect Immun 83: 1030-1038

Released	2015-01-14
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Glaesserella parasuis
Macromolecule	TbpB (protein)
Unique Ligands	GOL, NA, SO4

Explore in 3D

4QQ1 \| pdb_00004qq1	Download File View File

Crystal structure of the isotype 1 Transferrin binding protein B (TbpB) from serogroup B Neisseria meningitidis

Calmettes, C., Moraes, T.F.

(2015) Microbiologyopen 4: 491-504

Released	2015-04-01
Method	X-RAY DIFFRACTION 3.33 Å
Organisms	Neisseria meningitidis serogroup B
Macromolecule	Transferrin-binding protein 2 (protein)
Unique Ligands	CS, GOL, SO4

1 to 25 of 61 Structures

Page 1 of 3

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1J74 | pdb_00001j74

1J7D | pdb_00001j7d

2JW1 | pdb_00002jw1

2O4V | pdb_00002o4v

3FFV | pdb_00003ffv

3HOE | pdb_00003hoe

3HOL | pdb_00003hol

3KN7 | pdb_00003kn7

3KN8 | pdb_00003kn8

3NY7 | pdb_00003ny7

3OD7 | pdb_00003od7

3ODB | pdb_00003odb

3PQS | pdb_00003pqs

3PQU | pdb_00003pqu

3VE1 | pdb_00003ve1

3VE2 | pdb_00003ve2

4KY9 | pdb_00004ky9

4O3W | pdb_00004o3w

4O3X | pdb_00004o3x

4O3Y | pdb_00004o3y

4O3Z | pdb_00004o3z

4O49 | pdb_00004o49

4O4U | pdb_00004o4u

4O4X | pdb_00004o4x

4QQ1 | pdb_00004qq1